96 homologs were found in PanDaTox collection
for query gene Avin_08600 on replicon NC_012560
Organism: Azotobacter vinelandii DJ



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012560  Avin_08600  benzoate-1,2-dioxygenase oxygenase component, beta subunit  100 
 
 
162 aa  336  8e-92  Azotobacter vinelandii DJ  Bacteria  normal  0.273819  n/a   
 
 
-
 
NC_007492  Pfl01_2967  aromatic-ring-hydroxylating dioxygenase, beta subunit  74.38 
 
 
161 aa  263  7e-70  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_2687  benzoate 1,2-dioxygenase, small subunit  74.38 
 
 
161 aa  263  1e-69  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_2322  2-chlorobenzoate 1,2-dioxygenase  72.84 
 
 
162 aa  263  1e-69  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_2553  benzoate 1,2-dioxygenase  73.75 
 
 
161 aa  261  2e-69  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_32100  toluate 1,2-dioxygenase beta subunit  72.84 
 
 
162 aa  261  2e-69  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_3162  benzoate dioxygenase, beta subunit  73.12 
 
 
161 aa  260  4.999999999999999e-69  Pseudomonas putida KT2440  Bacteria  normal  0.391126  normal  0.421073 
 
 
-
 
NC_010501  PputW619_2709  benzoate 1,2-dioxygenase, small subunit  72.5 
 
 
161 aa  257  5.0000000000000005e-68  Pseudomonas putida W619  Bacteria  normal  normal  0.135302 
 
 
-
 
NC_009656  PSPA7_2720  toluate 1,2-dioxygenase subunit beta  69.75 
 
 
162 aa  257  6e-68  Pseudomonas aeruginosa PA7  Bacteria  normal  0.230068  n/a   
 
 
-
 
NC_011662  Tmz1t_3097  benzoate 1,2-dioxygenase, small subunit  70.37 
 
 
162 aa  249  8.000000000000001e-66  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_2779  aromatic-ring-hydroxylating dioxygenase, beta subunit  70.37 
 
 
162 aa  248  2e-65  Dechloromonas aromatica RCB  Bacteria  normal  0.663854  normal 
 
 
-
 
NC_011894  Mnod_2369  benzoate 1,2-dioxygenase, small subunit  66.87 
 
 
163 aa  235  2e-61  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.714007  n/a   
 
 
-
 
NC_009720  Xaut_1135  benzoate 1,2-dioxygenase  63.8 
 
 
163 aa  226  1e-58  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_1298  benzoate 1,2-dioxygenase, small subunit  62.5 
 
 
182 aa  219  1.9999999999999999e-56  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_2111  2-chlorobenzoate 1,2-dioxygenase  59.88 
 
 
162 aa  217  6e-56  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.0182348  normal  0.450254 
 
 
-
 
NC_013441  Gbro_4159  benzoate 1,2-dioxygenase, small subunit  61.64 
 
 
181 aa  217  7e-56  Gordonia bronchialis DSM 43247  Bacteria  normal  0.712193  n/a   
 
 
-
 
NC_009338  Mflv_1354  2-chlorobenzoate 1,2-dioxygenase  62.18 
 
 
179 aa  213  9.999999999999999e-55  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.160412  normal  0.158721 
 
 
-
 
NC_008146  Mmcs_1372  2-chlorobenzoate 1,2-dioxygenase  59.75 
 
 
173 aa  211  3.9999999999999995e-54  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_1390  2-chlorobenzoate 1,2-dioxygenase  59.75 
 
 
173 aa  211  3.9999999999999995e-54  Mycobacterium sp. KMS  Bacteria  normal  0.0521663  normal 
 
 
-
 
NC_009077  Mjls_1406  2-chlorobenzoate 1,2-dioxygenase  61.29 
 
 
173 aa  211  4.9999999999999996e-54  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_1325  benzoate 1,2-dioxygenase, small subunit  66.26 
 
 
163 aa  209  9e-54  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0504113 
 
 
-
 
NC_008686  Pden_1178  2-chlorobenzoate 1,2-dioxygenase  59.88 
 
 
162 aa  209  1e-53  Paracoccus denitrificans PD1222  Bacteria  normal  0.154958  normal 
 
 
-
 
NC_010623  Bphy_5351  benzoate 1,2-dioxygenase, small subunit  59.01 
 
 
167 aa  207  6e-53  Burkholderia phymatum STM815  Bacteria  normal  normal  0.449745 
 
 
-
 
NC_007952  Bxe_B0914  benzoate 1,2-dioxygenase subunit beta BenB  58.75 
 
 
163 aa  206  1e-52  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.419753 
 
 
-
 
NC_012856  Rpic12D_1429  benzoate 1,2-dioxygenase, small subunit  59.88 
 
 
162 aa  205  2e-52  Ralstonia pickettii 12D  Bacteria  decreased coverage  0.0021557  normal  0.293585 
 
 
-
 
NC_009511  Swit_2635  2-chlorobenzoate 1,2-dioxygenase  58.49 
 
 
171 aa  203  7e-52  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_007435  BURPS1710b_A1000  benzoate 1,2-dioxygenase beta subunit  58.71 
 
 
697 aa  200  7e-51  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A0214  benzoate 1,2-dioxygenase beta subunit  58.71 
 
 
163 aa  199  9.999999999999999e-51  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A2582  benzoate 1,2 dioxygenase, beta subunit  58.71 
 
 
163 aa  199  9.999999999999999e-51  Burkholderia pseudomallei 1106a  Bacteria  normal  0.509288  n/a   
 
 
-
 
NC_009075  BURPS668_A2726  benzoate 1,2 dioxygenase, beta subunit  58.71 
 
 
163 aa  199  9.999999999999999e-51  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_008835  BMA10229_1555  benzoate 1,2-dioxygenase beta subunit  58.71 
 
 
163 aa  199  9.999999999999999e-51  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_008784  BMASAVP1_1359  benzoate 1,2-dioxygenase beta subunit  58.71 
 
 
163 aa  199  9.999999999999999e-51  Burkholderia mallei SAVP1  Bacteria  normal  0.382783  n/a   
 
 
-
 
NC_006349  BMAA0186  benzoate 1,2-dioxygenase beta subunit  58.71 
 
 
163 aa  199  9.999999999999999e-51  Burkholderia mallei ATCC 23344  Bacteria  normal  0.270999  n/a   
 
 
-
 
NC_007650  BTH_II0472  benzoate 1,2-dioxygenase beta subunit  58.33 
 
 
163 aa  199  9.999999999999999e-51  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B4404  2-chlorobenzoate 1,2-dioxygenase  57.05 
 
 
163 aa  193  9e-49  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007509  Bcep18194_C7047  2-chlorobenzoate 1,2-dioxygenase  58.02 
 
 
162 aa  192  2e-48  Burkholderia sp. 383  Bacteria  normal  normal  0.402433 
 
 
-
 
NC_007794  Saro_0539  2-chlorobenzoate 1,2-dioxygenase  58.64 
 
 
161 aa  191  3e-48  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_007969  Pcryo_1266  2-chlorobenzoate 1,2-dioxygenase  55.9 
 
 
165 aa  191  4e-48  Psychrobacter cryohalolentis K5  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_1365  benzoate 1,2-dioxygenase, small subunit  59.26 
 
 
162 aa  190  8e-48  Ralstonia pickettii 12J  Bacteria  normal  0.0217955  normal  0.119188 
 
 
-
 
NC_007974  Rmet_4883  benzoate 1,2-dioxygenase subunit beta  56.13 
 
 
164 aa  188  2.9999999999999997e-47  Cupriavidus metallidurans CH34  Bacteria  normal  0.0428911  normal  0.181589 
 
 
-
 
NC_008544  Bcen2424_6525  2-chlorobenzoate 1,2-dioxygenase  56.17 
 
 
162 aa  179  1e-44  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_010512  Bcenmc03_6132  benzoate 1,2-dioxygenase, small subunit  55.56 
 
 
162 aa  179  2e-44  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_010086  Bmul_3239  benzoate 1,2-dioxygenase, small subunit  55.56 
 
 
162 aa  173  9.999999999999999e-43  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.144552 
 
 
-
 
NC_008392  Bamb_6583  2-chlorobenzoate 1,2-dioxygenase  54.32 
 
 
162 aa  171  2.9999999999999996e-42  Burkholderia ambifaria AMMD  Bacteria  normal  0.0528845  normal  0.624635 
 
 
-
 
NC_010557  BamMC406_6298  benzoate 1,2-dioxygenase, small subunit  54.32 
 
 
162 aa  171  3.9999999999999995e-42  Burkholderia ambifaria MC40-6  Bacteria  normal  hitchhiker  0.00502382 
 
 
-
 
NC_010681  Bphyt_1592  benzoate 1,2-dioxygenase, small subunit  54.32 
 
 
162 aa  169  1e-41  Burkholderia phytofirmans PsJN  Bacteria  normal  0.290973  normal 
 
 
-
 
NC_008463  PA14_32150  anthranilate dioxygenase small subunit  45.81 
 
 
163 aa  146  1.0000000000000001e-34  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.447185  normal 
 
 
-
 
NC_009656  PSPA7_2724  anthranilate dioxygenase small subunit  45.81 
 
 
163 aa  144  8.000000000000001e-34  Pseudomonas aeruginosa PA7  Bacteria  normal  0.248369  n/a   
 
 
-
 
NC_008060  Bcen_1305  2-chlorobenzoate 1,2-dioxygenase  58.06 
 
 
124 aa  141  4e-33  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_009426  Saro_3863  aromatic-ring-hydroxylating dioxygenase, beta subunit  42.95 
 
 
165 aa  130  1.0000000000000001e-29  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_1762  aromatic-ring-hydroxylating dioxygenase beta subunit  46.79 
 
 
164 aa  113  1.0000000000000001e-24  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.070154 
 
 
-
 
NC_007794  Saro_1681  aromatic-ring-hydroxylating dioxygenase, beta subunit  35.9 
 
 
166 aa  100  1e-20  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_0827  aromatic-ring-hydroxylating dioxygenase, beta subunit  31.9 
 
 
196 aa  65.5  0.0000000003  Nocardioides sp. JS614  Bacteria  normal  0.0728938  n/a   
 
 
-
 
NC_007298  Daro_3245  3-phenylpropionate dioxygenase subunit beta  32.08 
 
 
178 aa  57.8  0.00000007  Dechloromonas aromatica RCB  Bacteria  hitchhiker  0.00000856848  normal 
 
 
-
 
NC_009511  Swit_1757  aromatic-ring-hydroxylating dioxygenase, beta subunit  27.45 
 
 
175 aa  57  0.0000001  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_1875  aromatic-ring-hydroxylating dioxygenase, beta subunit  31.08 
 
 
162 aa  57  0.0000001  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_4175  aromatic-ring-hydroxylating dioxygenase, beta subunit  28.76 
 
 
160 aa  57  0.0000001  Sphingomonas wittichii RW1  Bacteria  hitchhiker  0.00253481  normal  0.0237067 
 
 
-
 
NC_009512  Pput_2897  aromatic-ring-hydroxylating dioxygenase, beta subunit  26.97 
 
 
180 aa  55.8  0.0000002  Pseudomonas putida F1  Bacteria  normal  0.367264  normal  0.364758 
 
 
-
 
NC_009485  BBta_3236  putative dioxygenase beta subunit  28 
 
 
158 aa  54.3  0.0000007  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.665811  normal  0.392142 
 
 
-
 
NC_007951  Bxe_A3555  p-cumate dioxygenase small subunit (CmtAc)  26.35 
 
 
180 aa  53.9  0.0000008  Burkholderia xenovorans LB400  Bacteria  normal  0.0559586  normal  0.808229 
 
 
-
 
NC_007509  Bcep18194_C7072  aromatic-ring-hydroxylating dioxygenase, beta subunit  29.08 
 
 
177 aa  53.5  0.000001  Burkholderia sp. 383  Bacteria  decreased coverage  0.00762065  normal  0.538573 
 
 
-
 
NC_007802  Jann_1344  aromatic-ring-hydroxylating dioxygenase, beta subunit  36.96 
 
 
159 aa  52.8  0.000002  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_1503  aromatic-ring-hydroxylating dioxygenase beta subunit  29.58 
 
 
155 aa  52.8  0.000002  Variovorax paradoxus S110  Bacteria  normal  0.223026  n/a   
 
 
-
 
NC_012560  Avin_42180  3-phenylpropionate dioxygenase subunit beta  37.23 
 
 
173 aa  52.4  0.000003  Azotobacter vinelandii DJ  Bacteria  normal  0.242382  n/a   
 
 
-
 
NC_012791  Vapar_0637  aromatic-ring-hydroxylating dioxygenase beta subunit  33.33 
 
 
178 aa  52.4  0.000003  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_012792  Vapar_5383  aromatic-ring-hydroxylating dioxygenase beta subunit  29.22 
 
 
162 aa  52.4  0.000003  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_0663  aromatic-ring-hydroxylating dioxygenase, beta subunit  34.91 
 
 
169 aa  50.8  0.000008  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_0487  aromatic-ring-hydroxylating dioxygenase, beta subunit  34.91 
 
 
169 aa  50.8  0.000008  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_008705  Mkms_1667  aromatic-ring-hydroxylating dioxygenase, beta subunit  34.91 
 
 
169 aa  50.1  0.00001  Mycobacterium sp. KMS  Bacteria  normal  0.595327  normal 
 
 
-
 
NC_009077  Mjls_2238  aromatic-ring-hydroxylating dioxygenase, beta subunit  36.17 
 
 
169 aa  50.1  0.00001  Mycobacterium sp. JLS  Bacteria  normal  0.566158  normal 
 
 
-
 
NC_008705  Mkms_1660  aromatic-ring-hydroxylating dioxygenase, beta subunit  34.91 
 
 
169 aa  50.1  0.00001  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_008705  Mkms_1717  aromatic-ring-hydroxylating dioxygenase, beta subunit  31.11 
 
 
172 aa  50.4  0.00001  Mycobacterium sp. KMS  Bacteria  normal  0.838808  normal 
 
 
-
 
NC_008726  Mvan_0547  aromatic-ring-hydroxylating dioxygenase, beta subunit  31.11 
 
 
172 aa  50.4  0.00001  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.948584 
 
 
-
 
NC_008703  Mkms_5625  aromatic-ring-hydroxylating dioxygenase, beta subunit  36.17 
 
 
169 aa  50.1  0.00001  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_008703  Mkms_5621  aromatic-ring-hydroxylating dioxygenase, beta subunit  34.91 
 
 
169 aa  50.1  0.00001  Mycobacterium sp. KMS  Bacteria  normal  0.0675281  normal 
 
 
-
 
NC_009077  Mjls_1661  aromatic-ring-hydroxylating dioxygenase, beta subunit  31.11 
 
 
172 aa  50.4  0.00001  Mycobacterium sp. JLS  Bacteria  normal  0.0144814  normal 
 
 
-
 
NC_008146  Mmcs_1690  aromatic-ring-hydroxylating dioxygenase, beta subunit  31.11 
 
 
172 aa  50.4  0.00001  Mycobacterium sp. MCS  Bacteria  normal  0.0766019  n/a   
 
 
-
 
NC_009338  Mflv_0536  aromatic-ring-hydroxylating dioxygenase, beta subunit  31.11 
 
 
172 aa  50.4  0.00001  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_0568  aromatic-ring-hydroxylating dioxygenase, beta subunit  36.17 
 
 
169 aa  50.1  0.00001  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.924793  normal 
 
 
-
 
NC_008146  Mmcs_1634  aromatic-ring-hydroxylating dioxygenase, beta subunit  35.24 
 
 
236 aa  50.1  0.00001  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_1641  aromatic-ring-hydroxylating dioxygenase, beta subunit  34.91 
 
 
169 aa  50.1  0.00001  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_0572  aromatic-ring-hydroxylating dioxygenase, beta subunit  36.17 
 
 
181 aa  49.3  0.00002  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.455615  normal 
 
 
-
 
NC_009338  Mflv_0670  aromatic-ring-hydroxylating dioxygenase, beta subunit  36.17 
 
 
181 aa  49.3  0.00002  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_2244  aromatic-ring-hydroxylating dioxygenase, beta subunit  36.17 
 
 
169 aa  48.9  0.00003  Mycobacterium sp. JLS  Bacteria  normal  0.0227902  normal 
 
 
-
 
NC_009077  Mjls_1607  aromatic-ring-hydroxylating dioxygenase, beta subunit  36.17 
 
 
169 aa  48.9  0.00003  Mycobacterium sp. JLS  Bacteria  normal  0.279924  normal 
 
 
-
 
NC_008726  Mvan_0483  aromatic-ring-hydroxylating dioxygenase, beta subunit  36.17 
 
 
169 aa  48.9  0.00003  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.122818  normal 
 
 
-
 
NC_009511  Swit_0889  aromatic-ring-hydroxylating dioxygenase, beta subunit  26.14 
 
 
176 aa  47.8  0.00006  Sphingomonas wittichii RW1  Bacteria  normal  0.93204  normal  0.763516 
 
 
-
 
NC_009485  BBta_3193  putative aromatic-ring-hydroxylating dioxygenase, beta subunit  28.93 
 
 
217 aa  46.6  0.0001  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_1994  aromatic-ring-hydroxylating dioxygenase, beta subunit  28.22 
 
 
180 aa  45.8  0.0002  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.605287 
 
 
-
 
NC_009426  Saro_3843  3-phenylpropionate dioxygenase subunit beta  32.04 
 
 
183 aa  45.4  0.0003  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_009511  Swit_1532  aromatic-ring-hydroxylating dioxygenase, beta subunit  25 
 
 
162 aa  45.4  0.0004  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.014275 
 
 
-
 
NC_009511  Swit_4281  aromatic-ring-hydroxylating dioxygenase, beta subunit  28.87 
 
 
187 aa  45.1  0.0005  Sphingomonas wittichii RW1  Bacteria  normal  0.119212  normal  0.807745 
 
 
-
 
NC_013739  Cwoe_0436  aromatic-ring-hydroxylating dioxygenase beta subunit  28.85 
 
 
167 aa  44.3  0.0007  Conexibacter woesei DSM 14684  Bacteria  normal  decreased coverage  0.00439897 
 
 
-
 
NC_007650  BTH_II0326  ring hydroxylating beta subunit  20.86 
 
 
166 aa  43.1  0.002  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_4416  benzene 1,2-dioxygenase  29.01 
 
 
187 aa  42.7  0.002  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.258454  normal 
 
 
-
 
NC_008786  Veis_2678  aromatic-ring-hydroxylating dioxygenase, beta subunit  23.03 
 
 
165 aa  42  0.003  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
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