Gene Swit_1757 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1757 
Symbol 
ID5200191 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp1965797 
End bp1966324 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content67% 
IMG OID640581304 
Productaromatic-ring-hydroxylating dioxygenase, beta subunit 
Protein accessionYP_001262257 
Protein GI148554675 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG5517] Small subunit of phenylpropionate dioxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACCA TCGAACGCGC CGGCGCGCCG GCGGACCGGC AGGGCGGGAC GCCCACGCGA 
TCGGAGATCG AGGACTTCCT CTATCTGGAG GCGGCGCTGC TCGACGAATG GAAGCTCGAC
GAATGGCTGG CGCTGTTCGC CGAGGGCGCG ACCTATGACG TGCCCACCAC CAGGGCGGAC
GACGACGCGG ACTCGGCCGA CCAGCTTTTC CTGGTCGCCG ACGATTATGC GCGGCTCCAG
CATCGCGTGC GCCGGCTGAA GAAGCCGGGC GCCCATTCCG AATGGCCCCG CTCGCGCACC
GCGCACAGCA TCTCCAACGT CCGCATCGTC GAGGCGGAGG GCGACGAGGT GCTGGTCCGA
TCGGTGTTCG TGACCTACCG GGCCAAGAAC GACGTGACCG ATTGCTATTT CGGCCACCAT
TTCCACCGCA TTCGCGTCCA GGCGGACGGG CTGAGGATCC TGTCGAAGCG CAGCATGCTC
GACATGAGCA GCCTGCGTCC GCACGGGCGC GTCAGCATCA TCGTCTGA
 
Protein sequence
MATIERAGAP ADRQGGTPTR SEIEDFLYLE AALLDEWKLD EWLALFAEGA TYDVPTTRAD 
DDADSADQLF LVADDYARLQ HRVRRLKKPG AHSEWPRSRT AHSISNVRIV EAEGDEVLVR
SVFVTYRAKN DVTDCYFGHH FHRIRVQADG LRILSKRSML DMSSLRPHGR VSIIV