Gene BURPS1106A_A2582 details

Gene Information

• Locus tag: BURPS1106A_A2582
• Symbol: benB
• ID: 4904224
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 1106a
• Kingdom: Bacteria
• Replicon accession: NC_009078
• Strand: +
• Start bp: 2536132
• End bp: 2536623
• Gene Length: 492 bp
• Protein Length: 163 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 640145685
• Product: benzoate 1,2 dioxygenase, beta subunit
• Protein accession: YP_001076612
• Protein GI: 126458155
• COG category: [Q] Secondary metabolites biosynthesis, transport and catabolism
• COG ID: [COG5517] Small subunit of phenylpropionate dioxygenase
• TIGRFAM ID: [TIGR03232] benzoate 1,2-dioxygenase, small subunit

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.509288
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGACGA TCGATCTCGC CGACATCCAG GCGTTCCTCT ATCGCGAGAG CCGGCTGCTC 
GACGACAAGG CGTGGGACGC ATGGCTCGAC TGCTATCGCG CGGACGCCGT GTTCTGGATG 
CCTTCCTGGG ACGACGCGGA TGCGCTCGTC ACCGATCCGC AGCGCGAAAT CTCGCTGATC 
TACTACCCGA ACCGGCAGGG GCTCGAGGAT CGCGTGTTCC GCATCAAGAC CGAGCGCTCG 
AGCGCGACGG TGCCCGATAC GCGCACGAGC CACAACATCG CGAACGTCGA GCGCGAAAGC 
GCCGATGGCG ACGTGCACAC CGTGCGCTTC AACTGGCACA CGCTCAGCTA TCGCTACAAG 
ACGGTGTCGA GCTATTTCGG CATGTCGCGC TACGCGATCG ATTTCTCCGG CGACGCGCCG 
AAGATCGTCA GCAAGTACGT CGTCCTGAAG AACGACTACA TCAACCAGCT GATCGACATC 
TACCACATCT AG 

 

Protein sequence

MKTIDLADIQ AFLYRESRLL DDKAWDAWLD CYRADAVFWM PSWDDADALV TDPQREISLI 
YYPNRQGLED RVFRIKTERS SATVPDTRTS HNIANVERES ADGDVHTVRF NWHTLSYRYK 
TVSSYFGMSR YAIDFSGDAP KIVSKYVVLK NDYINQLIDI YHI