Gene Pnap_2111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2111 
Symbol 
ID4689071 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2250727 
End bp2251215 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content60% 
IMG OID639835122 
Product2-chlorobenzoate 1,2-dioxygenase 
Protein accessionYP_982341 
Protein GI121605012 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG5517] Small subunit of phenylpropionate dioxygenase 
TIGRFAM ID[TIGR03232] benzoate 1,2-dioxygenase, small subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0182348 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.450254 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATGA CGATTGACCA AGTTCAAGCC TTCCTCTACC GCGAAGCCCG TTTGCTCGAT 
GACAGGCAGT GGGACGAGTG GCTGACCTGC TATGCCCCGG ATGCCGAATT CTGGATGCCC
GCCTGGGACG ATGACGGCGA GATGACGCGC GACCCGCAGT CTGAAATCTC GCTGATCTAC
TACGCCAACC GGGGCGGTCT TGAAGACCGC GTGTTCCGCA TCAAGACCGA GCGTTCGGCG
GCCAGCATGC CCGAGCCGCG CACCGGCCAC CAGATCACGA ATGTCGAGAT CGTGTCGCAG
GACGGCAGCG AAGTGTGCGT GCGCTTTAAC TGGAACACGC TGAGCTACCG CTACAGCATG
ACGGACAGCT ACTTCGGCAC CTCGCATTAC ACGCTCGACG TGTCCAGCGC GCAGCCGCTG
ATCAAGCGCA AGCGCGTCGT GCTGAAAAAC GACTACATCC ACCACGTCAT CGACGTCTAT
CACATCTGA
 
Protein sequence
MTMTIDQVQA FLYREARLLD DRQWDEWLTC YAPDAEFWMP AWDDDGEMTR DPQSEISLIY 
YANRGGLEDR VFRIKTERSA ASMPEPRTGH QITNVEIVSQ DGSEVCVRFN WNTLSYRYSM
TDSYFGTSHY TLDVSSAQPL IKRKRVVLKN DYIHHVIDVY HI