Gene Swit_1875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_1875 
Symbol 
ID5199526 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp2100909 
End bp2101397 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content69% 
IMG OID640581420 
Productaromatic-ring-hydroxylating dioxygenase, beta subunit 
Protein accessionYP_001262373 
Protein GI148554791 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG5517] Small subunit of phenylpropionate dioxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGCCG ATCCGCTGCT GACCCACGCC GCCGCCGACT ATCTCTTCCG CGAGGCCGAG 
CTTCTCGACG GCCGGCGGTG GGAGGAATGG GACGCGCTGT TCGCCGAGGA CGGCATGTAC
TGGGTGCCGC TCCGCCACGA CCAGCAGGAC CCGTTCAACC ATGCCTCGCT GTTCTACGAG
GACGCGATCC TGCGCGACGT GCGCCGGCGG CGGCTGGAGG AAAAGCATGC CTGGTCGCAG
CAGCCGGTGA CGCGGACGGC GCACATCGTC GGCAACGTCC GGATCGTCGC GCAGGACGGC
GCGGGCCTGC GGGTGCGATC GGCCTTCCAG ATCACCGAAT GGCGCCAGGG CCGCGACCAG
CGCCAGCTTG CCGGCCATTA CACCCATGAC CTCGTCGGCG CCGGGCCGGA CGACTGGCGG
ATCGCGCTGA AGCGGGTCGA CCTGATCAAC TGCGACGGCA TCCAGGACCC TTATGAGGTG
TTCCTGTGA
 
Protein sequence
MIADPLLTHA AADYLFREAE LLDGRRWEEW DALFAEDGMY WVPLRHDQQD PFNHASLFYE 
DAILRDVRRR RLEEKHAWSQ QPVTRTAHIV GNVRIVAQDG AGLRVRSAFQ ITEWRQGRDQ
RQLAGHYTHD LVGAGPDDWR IALKRVDLIN CDGIQDPYEV FL