Gene Daro_3245 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3245 
Symbol 
ID3566591 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3495999 
End bp3496535 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content62% 
IMG OID637681716 
Product3-phenylpropionate dioxygenase subunit beta 
Protein accessionYP_286445 
Protein GI71908858 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG5517] Small subunit of phenylpropionate dioxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.00000856848 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCA AACAACAACT GAAGGAAGTG CCGGTCGACC GCGACACCCT GCACAAGGTT 
GAACAGTTCC TCTATCGCGA AGCCCGCCTG CTCGACAACG AGCGCTGGGA CGACTGGCTG
GCGCTGATGG CCGAAGACAT CCACTACTGG ATGCCGACCA TGGAAAACCG CCGCCGGGCC
GACAAGAACG GCGCCTATGC CGTCGATCGC GGCGCGCTGT ACAACGACAA CCTGCTCGAC
CTGACCCGCC GCATTACCCG CTTCAAGCAG CCGACGGCCT GGGCCGAGGA TCCGGCGACC
CGCCACGCCC ATGTCGTTTC CGGCATCGAG GTTTATCAGG GCGACAAGGC CGACGAGTTC
GTCGTTCATA GCAGCTTCGT GAACTACCGC AGCCGGGTCG AGAAAGACAA CGACCTGCTG
GTCGGTCGGC GCGAGGATGT GCTGCGGGCC GACGGTGACA GCTTCAGGCT GGCTCGGCGC
AAGATCATCA TCACCCAGTC GGTGCTGATG GCCAAGAACC TCAACACTTT CCTCTGA
 
Protein sequence
MSAKQQLKEV PVDRDTLHKV EQFLYREARL LDNERWDDWL ALMAEDIHYW MPTMENRRRA 
DKNGAYAVDR GALYNDNLLD LTRRITRFKQ PTAWAEDPAT RHAHVVSGIE VYQGDKADEF
VVHSSFVNYR SRVEKDNDLL VGRREDVLRA DGDSFRLARR KIIITQSVLM AKNLNTFL