Gene Swit_0889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_0889 
Symbol 
ID5199593 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp979889 
End bp980419 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content62% 
IMG OID640580435 
Productaromatic-ring-hydroxylating dioxygenase, beta subunit 
Protein accessionYP_001261394 
Protein GI148553812 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG5517] Small subunit of phenylpropionate dioxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.93204 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.763516 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTGTCTC AGATCGACAA GCAAATCGAA CGGCAGTTTC GCGTCGAACA GTTCCTCTAT 
CGGGAAGCCG ATCTCCTCGA TAGCTGGGAG TGGGGGAAGT GGTTCGAACT CTTCACGGAA
GACGTCCGCT ACTGGATGCC GCTCCGGCGG AACCTGCAGC GCCGCGAGCG CGGTACGGGA
CAGTTGCCGA CCGGCCTCGA AATGGCGCTC GTCGACGATG ATCACACGCA GCTCAAGATG
CGCGTCCAGC AGATGTCGTC CGGGCGGCAC TGGGCGGAAG ACCCGCCCTC GCGGTGCCGC
CATCTGATCT CCAACGTCGT CGTCGTCGAG GAAGACGAGG CCAAGCAGGA ACTCGTCGTC
CGCTCCAATT TCATCGTCTA TCGCAACCGC CTCGAGCGGG AAGTGGATAT CTGGGCGGGC
AATCGCGAAG ACACGCTGCG GCGGCAGGGG GATTCCTTCC GGATCGCCAG CCGGACCATC
CTGCTGGACC AGAATGTGGT TCTGTCGAAG AACCTCAGCG TCTTCTTCTG A
 
Protein sequence
MVSQIDKQIE RQFRVEQFLY READLLDSWE WGKWFELFTE DVRYWMPLRR NLQRRERGTG 
QLPTGLEMAL VDDDHTQLKM RVQQMSSGRH WAEDPPSRCR HLISNVVVVE EDEAKQELVV
RSNFIVYRNR LEREVDIWAG NREDTLRRQG DSFRIASRTI LLDQNVVLSK NLSVFF