Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_0889 |
Symbol | |
ID | 5199593 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 979889 |
End bp | 980419 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640580435 |
Product | aromatic-ring-hydroxylating dioxygenase, beta subunit |
Protein accession | YP_001261394 |
Protein GI | 148553812 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG5517] Small subunit of phenylpropionate dioxygenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 0.93204 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.763516 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGTGTCTC AGATCGACAA GCAAATCGAA CGGCAGTTTC GCGTCGAACA GTTCCTCTAT CGGGAAGCCG ATCTCCTCGA TAGCTGGGAG TGGGGGAAGT GGTTCGAACT CTTCACGGAA GACGTCCGCT ACTGGATGCC GCTCCGGCGG AACCTGCAGC GCCGCGAGCG CGGTACGGGA CAGTTGCCGA CCGGCCTCGA AATGGCGCTC GTCGACGATG ATCACACGCA GCTCAAGATG CGCGTCCAGC AGATGTCGTC CGGGCGGCAC TGGGCGGAAG ACCCGCCCTC GCGGTGCCGC CATCTGATCT CCAACGTCGT CGTCGTCGAG GAAGACGAGG CCAAGCAGGA ACTCGTCGTC CGCTCCAATT TCATCGTCTA TCGCAACCGC CTCGAGCGGG AAGTGGATAT CTGGGCGGGC AATCGCGAAG ACACGCTGCG GCGGCAGGGG GATTCCTTCC GGATCGCCAG CCGGACCATC CTGCTGGACC AGAATGTGGT TCTGTCGAAG AACCTCAGCG TCTTCTTCTG A
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Protein sequence | MVSQIDKQIE RQFRVEQFLY READLLDSWE WGKWFELFTE DVRYWMPLRR NLQRRERGTG QLPTGLEMAL VDDDHTQLKM RVQQMSSGRH WAEDPPSRCR HLISNVVVVE EDEAKQELVV RSNFIVYRNR LEREVDIWAG NREDTLRRQG DSFRIASRTI LLDQNVVLSK NLSVFF
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