| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2709 |
|---|
| Symbol | |
|---|
| ID | 6111660 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 3000758 |
|---|
| End bp | 3001243 |
|---|
| Gene Length | 486 bp |
|---|
| Protein Length | 161 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641622496 |
|---|
| Product | benzoate 1,2-dioxygenase, small subunit |
|---|
| Protein accession | YP_001749570 |
|---|
| Protein GI | 170721882 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG5517] Small subunit of phenylpropionate dioxygenase |
|---|
| TIGRFAM ID | [TIGR03232] benzoate 1,2-dioxygenase, small subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.135302 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCTTC ATGAGACCGT GCGCGACTTC CTGTACCGCG AAGCGCGCTA CCTGGACGAT
GCACAGTGGG ACCAGTGGCT GGAATTGTAT GCCAGCGATG CAAGCTTCTG GATGCCCGCG
TGGGATGACG ACGACCGCCT CACCACCGAT CCGCAAAGCG AGATCTCGCT GATCTGGTAC
GGCAACCGTG GCGGCCTCGA GGACCGGGTG TTCCGTATCA AGACCGAGCG TTCCAGTGCG
ACCGTGCCCG ACACCCGCAC CTCGCACAAC ATCAGCAACA TCGAGATCGT CGAGCAGGGT
GAGGGCTACT GCCAGGTGCG CTTCAACTGG CACACGCTGA GCTTTCGCTA CAAGACCACC
GACAGCTACT TCGGTACGAG CTTCTATACC CTGGACCTGC GCGGCGAACA GCCGCTTATC
AAGGCCAAGA AGGTGGTGCT GAAGAACGAC TACGTGCGTC AGGTCATCGA CATCTACCAC
ATCTGA
|
|---|
| Protein sequence | MSLHETVRDF LYREARYLDD AQWDQWLELY ASDASFWMPA WDDDDRLTTD PQSEISLIWY
GNRGGLEDRV FRIKTERSSA TVPDTRTSHN ISNIEIVEQG EGYCQVRFNW HTLSFRYKTT
DSYFGTSFYT LDLRGEQPLI KAKKVVLKND YVRQVIDIYH I
|
|---|
| |