Gene Avin_08600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_08600 
SymbolbenB 
ID7759812 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand+ 
Start bp817879 
End bp818367 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content62% 
IMG OID643803776 
Productbenzoate-1,2-dioxygenase oxygenase component, beta subunit 
Protein accessionYP_002798078 
Protein GI226943005 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG5517] Small subunit of phenylpropionate dioxygenase 
TIGRFAM ID[TIGR03232] benzoate 1,2-dioxygenase, small subunit 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.273819 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGCAA CTTACGAAGC CGTACGCGAC TTCCTCTACC GCGAAGCCCG CTACCTGGAC 
GAGAAGGACT GGGACGGCTG GCTGGAGCAG TACGCGCCCG ACTGCACCTT CTGGATGCCG 
ACCTGGGACG ACCGCGATGA ACTGACCGAG GACCCGCAGA GCCAGATCTC GCTGATCTGG 
TATGGCAGCC GCAGCGGCCT GGAGGACCGG GTATTCCGCA TCCGTACCGA GCGTTCCAGC 
GCGACCATTC CGGATACCCG CACCTCGCAC AACATCGCCA ACCTGGAAAT CCTCGAAAAG 
ACCGACGAGC TGTGCCGCCT GCGCTTCAAC TGGCACACCC TGAGCTTCCG CTACAAGATC 
GTCGACCAGT TCTACGGCAC CAGCTTCTAC ACCCTGGACA TCCGCGGCGC GAACCCGCTG 
ATCAAGGAGA AGAAGGTCGT GCTGAAGAAC GACTACGTGC GTCACGTCCT CGACGTCTAC 
CACGTCTGA
 
Protein sequence
MSATYEAVRD FLYREARYLD EKDWDGWLEQ YAPDCTFWMP TWDDRDELTE DPQSQISLIW 
YGSRSGLEDR VFRIRTERSS ATIPDTRTSH NIANLEILEK TDELCRLRFN WHTLSFRYKI 
VDQFYGTSFY TLDIRGANPL IKEKKVVLKN DYVRHVLDVY HV