Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_1592 |
Symbol | |
ID | 6284737 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 1790983 |
End bp | 1791471 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642621153 |
Product | benzoate 1,2-dioxygenase, small subunit |
Protein accession | YP_001895226 |
Protein GI | 187923584 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG5517] Small subunit of phenylpropionate dioxygenase |
TIGRFAM ID | [TIGR03232] benzoate 1,2-dioxygenase, small subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.290973 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTTCG ATCACCAGAC AATTTGCGCG GTGCTGTTCC GCGAAGCGCG CCTGCTGGAC GACCGTCAAT GGGACGAATG GCTCGCCTGC TATACCGAGG ATGTCACGTA CTGGATGCCG GCGTGGGATG ACGATGACCA GCTCACCGAC GACCACGAGA GTCAGATTTC GCTGATGTAT TACCCGGACC GTGGCGGCCT TGAAGACCGT GTGTTCCGCA TCAAGACCGA GCGCAGCAGT GCCTCGATGC CTGAACCGCG AACCAGTCAC AACGTCACCA ATGTGGAAGT GCTGGCCGAG CGCGAGAACG AAGTGGACGT GCGCTACAAC TTCAACACAC TCAGCCACCG TTACAGAACC ACCGACCAGT TTTTCGGCAC GATGTTCGTC ACTCTGCGCA AGGTCAACGA TGAGCTGTTG ATTTGCTACA AGCGCATCGT GTTGAAGGAC GATTACATCC GCCAGGTACT CGACGTCTAT CACGTTTGA
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Protein sequence | MSFDHQTICA VLFREARLLD DRQWDEWLAC YTEDVTYWMP AWDDDDQLTD DHESQISLMY YPDRGGLEDR VFRIKTERSS ASMPEPRTSH NVTNVEVLAE RENEVDVRYN FNTLSHRYRT TDQFFGTMFV TLRKVNDELL ICYKRIVLKD DYIRQVLDVY HV
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