Gene Bphyt_1592 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_1592 
Symbol 
ID6284737 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp1790983 
End bp1791471 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content56% 
IMG OID642621153 
Productbenzoate 1,2-dioxygenase, small subunit 
Protein accessionYP_001895226 
Protein GI187923584 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG5517] Small subunit of phenylpropionate dioxygenase 
TIGRFAM ID[TIGR03232] benzoate 1,2-dioxygenase, small subunit 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.290973 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTTCG ATCACCAGAC AATTTGCGCG GTGCTGTTCC GCGAAGCGCG CCTGCTGGAC 
GACCGTCAAT GGGACGAATG GCTCGCCTGC TATACCGAGG ATGTCACGTA CTGGATGCCG
GCGTGGGATG ACGATGACCA GCTCACCGAC GACCACGAGA GTCAGATTTC GCTGATGTAT
TACCCGGACC GTGGCGGCCT TGAAGACCGT GTGTTCCGCA TCAAGACCGA GCGCAGCAGT
GCCTCGATGC CTGAACCGCG AACCAGTCAC AACGTCACCA ATGTGGAAGT GCTGGCCGAG
CGCGAGAACG AAGTGGACGT GCGCTACAAC TTCAACACAC TCAGCCACCG TTACAGAACC
ACCGACCAGT TTTTCGGCAC GATGTTCGTC ACTCTGCGCA AGGTCAACGA TGAGCTGTTG
ATTTGCTACA AGCGCATCGT GTTGAAGGAC GATTACATCC GCCAGGTACT CGACGTCTAT
CACGTTTGA
 
Protein sequence
MSFDHQTICA VLFREARLLD DRQWDEWLAC YTEDVTYWMP AWDDDDQLTD DHESQISLMY 
YPDRGGLEDR VFRIKTERSS ASMPEPRTSH NVTNVEVLAE RENEVDVRYN FNTLSHRYRT
TDQFFGTMFV TLRKVNDELL ICYKRIVLKD DYIRQVLDVY HV