Gene Rpic_1365 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1365 
Symbol 
ID6287923 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1463623 
End bp1464111 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content61% 
IMG OID642624933 
Productbenzoate 1,2-dioxygenase, small subunit 
Protein accessionYP_001898939 
Protein GI187928452 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG5517] Small subunit of phenylpropionate dioxygenase 
TIGRFAM ID[TIGR03232] benzoate 1,2-dioxygenase, small subunit 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0217955 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.119188 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTCCA ATTACCACAA CATCTGCGCG GCTCTGTACC GTGAAGCGCG GCTGCTCGAC 
GACCGCCAGT GGGACGCTTG GCTGGAGTGC TACGCGGAGG ACGTCACCTA CTGGATGCCG
GCATGGGATG ACGATGACCA GCTGACCGAC GACCCGCAAA GCCAGATCTC GCTGATGTAC
TACGCCAATC GCTGCGGGCT GGAGGATCGC GTCTTCCGTA TCAAGACCGA GCGCAGCGGC
GCGTCCACGC CGGAACCGCG AACCAGCCAC ACCGTCACCA ACGTGGAAGT CCTGGCCGAA
CGCGGCGATG AAGTCGACGT GCGCTACAAC TTTCACACAC TCAGCCACCG ATACAAAACC
ACCGATCACT TCTTCGGCAC GATGTTCGTC ACCCTGCGCC GCGCCGGCGA AGGTTTCCTG
ATCGCATCCA AGAAGATCGT CCTGAAGAAC GACTACATCC GGCAGGTGCT CGACGTCTAT
CACGTCTGA
 
Protein sequence
MSSNYHNICA ALYREARLLD DRQWDAWLEC YAEDVTYWMP AWDDDDQLTD DPQSQISLMY 
YANRCGLEDR VFRIKTERSG ASTPEPRTSH TVTNVEVLAE RGDEVDVRYN FHTLSHRYKT
TDHFFGTMFV TLRRAGEGFL IASKKIVLKN DYIRQVLDVY HV