Gene Bamb_6583 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_6583 
Symbol 
ID4315487 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008392 
Strand
Start bp1274011 
End bp1274499 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content63% 
IMG OID638154427 
Product2-chlorobenzoate 1,2-dioxygenase 
Protein accessionYP_778461 
Protein GI115361324 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG5517] Small subunit of phenylpropionate dioxygenase 
TIGRFAM ID[TIGR03232] benzoate 1,2-dioxygenase, small subunit 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0528845 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.624635 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATCG ATTACCGGAC CATTTGCGCG GCGCTGTATC GCGAAGCGCG CCTGCTCGAC 
GATCGCGAGT GGGACGAGTG GCTGACCTGC TACACGGAGG ACGTCACGTA CTGGATGCCC
GCGTGGGACG ACGACGACCG GCCGACCGAC GATCCGCAAA GCGAGATCTC GCTGATGTAC
TACGCGGATC GCGGCGGCCT CGAGGATCGC GTGTTCCGGA TCAAGACCGA GCGCAGCGGC
GCGTCGACAC CCGAGCCGCG CACCAGCCAC AACGTGACGA ACGTCGAGGT GCTGGCCGAG
CGCGACGGCG AGGTGGACGT GCGCTACAAC TTCGACACGC TCAACCATCG CTACCGCGTG
ACCGATCACT ACTTCGGCAC GATGTTCGTC ACGCTGCGCA AGGTGAACGA CGCGCTGCTG
ATCTCGCACA AGAAGATCGT GCTGAAGAAC GACTATATCC GGCAGGTGCT CGACGTGTAT
CACGTCTGA
 
Protein sequence
MNIDYRTICA ALYREARLLD DREWDEWLTC YTEDVTYWMP AWDDDDRPTD DPQSEISLMY 
YADRGGLEDR VFRIKTERSG ASTPEPRTSH NVTNVEVLAE RDGEVDVRYN FDTLNHRYRV
TDHYFGTMFV TLRKVNDALL ISHKKIVLKN DYIRQVLDVY HV