Gene BBta_3193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3193 
Symbol 
ID5151455 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3343595 
End bp3344248 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content65% 
IMG OID640558058 
Productputative aromatic-ring-hydroxylating dioxygenase, beta subunit 
Protein accessionYP_001239211 
Protein GI148254626 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG5517] Small subunit of phenylpropionate dioxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCCGC TCGATCCCGG AATGAATATC GCCTTGGATG ATGGTTTCAC GCTCAAGGAC 
ATTCTGCGCG ACAGCCTGGA ATCGACCTAT GTTGACGATG CCTATTATGC TCGGCTGCGC
GGCGATCTCG ACGAATGGCA GGCGATCGGC ACGCCGCTCA CCGAGGCCGA GCGGCAGCGC
TACGAGGCGC TGATCCTGCA TGAGCACTGG CTGCTCGACC GCCGCGCCTT TGAACGCTGG
TATCAGCTCT ACACCCGGCA ATGCCTGTAC TGGGTGCCCG CGGCTGGCGA CATGCCCGAC
GCCGTCAGGG GCGATCCGCA GCGCCAGGTG ACGATCGCCT TCGACGACCG CCGGCGGATG
GGCGATCGCA TCGTCTGGCT GCGCACCGGC GTGGCGTCGT CGCAGCTGCC GCCATCCTAC
ACCAGCCATC TGAGTGCCGG CTTCGTGCGC ATCGCCACGG CCGCGGACGG CGAGGTCAAG
ATCCGCTCGC AATTCATCGT CCACGAGATG CGCGCCGGTC ATGTCGTGCA GACCCTGACC
GGCTGGATGG GGCACGTGCT GCGCGAGGAG GACGGCCGGC TCAAGATCGA CCGCAAGCTG
GTGGCGCTGC TCGATGCCGC CAGAAGCCAG CACAACATGA CGTTCCTGCT CTGA
 
Protein sequence
MTPLDPGMNI ALDDGFTLKD ILRDSLESTY VDDAYYARLR GDLDEWQAIG TPLTEAERQR 
YEALILHEHW LLDRRAFERW YQLYTRQCLY WVPAAGDMPD AVRGDPQRQV TIAFDDRRRM
GDRIVWLRTG VASSQLPPSY TSHLSAGFVR IATAADGEVK IRSQFIVHEM RAGHVVQTLT
GWMGHVLREE DGRLKIDRKL VALLDAARSQ HNMTFLL