Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_3236 |
Symbol | |
ID | 5153471 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 3390785 |
End bp | 3391261 |
Gene Length | 477 bp |
Protein Length | 158 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640558102 |
Product | putative dioxygenase beta subunit |
Protein accession | YP_001239249 |
Protein GI | 148254664 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG5517] Small subunit of phenylpropionate dioxygenase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.665811 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.392142 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCACCG AGAAGAGCAT CACCGATTTC ATCTATCGCG AGGCCGAGCT TCTCGACACG ATGCAGTGGG ACGCGTGGCT CGCTCTGTTC CACGCCAGTG GGCGCTATTG GATGCCGCTG GAATGGCAGC AGCAGGATCC CGTGCTGCAG CCGTCCTTGA TGTATGAGGA TCTGCTGCTG CTGAAGGTGC GTGTGGAGCG ATTGGCGGGT GAGCGAACCT TCAGCCAGAA GCCGAAGAGT CGCTGCCATC ATCTGCTGCA GGCGCCGACG ATCACTGCCT GCGATCCGGC CAATGGACTG TTCAAGGCGC GGACGTCTTT CATCTATACC GAGACCCGTG GGGATGTGCT TGAACGCTAT TCGGGATGGG CGTCGCACGA CCTGATCGAG AGCGATGGTC ACCTGAAAAT CAAGCTGAAG CGGATCGATC TCGTCAATTT CGACGCTCCG TTCGGCAACA TCCAGCTCTT CATGTGA
|
Protein sequence | MITEKSITDF IYREAELLDT MQWDAWLALF HASGRYWMPL EWQQQDPVLQ PSLMYEDLLL LKVRVERLAG ERTFSQKPKS RCHHLLQAPT ITACDPANGL FKARTSFIYT ETRGDVLERY SGWASHDLIE SDGHLKIKLK RIDLVNFDAP FGNIQLFM
|
| |