Gene BBta_3236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3236 
Symbol 
ID5153471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp3390785 
End bp3391261 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content58% 
IMG OID640558102 
Productputative dioxygenase beta subunit 
Protein accessionYP_001239249 
Protein GI148254664 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG5517] Small subunit of phenylpropionate dioxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.665811 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.392142 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCACCG AGAAGAGCAT CACCGATTTC ATCTATCGCG AGGCCGAGCT TCTCGACACG 
ATGCAGTGGG ACGCGTGGCT CGCTCTGTTC CACGCCAGTG GGCGCTATTG GATGCCGCTG
GAATGGCAGC AGCAGGATCC CGTGCTGCAG CCGTCCTTGA TGTATGAGGA TCTGCTGCTG
CTGAAGGTGC GTGTGGAGCG ATTGGCGGGT GAGCGAACCT TCAGCCAGAA GCCGAAGAGT
CGCTGCCATC ATCTGCTGCA GGCGCCGACG ATCACTGCCT GCGATCCGGC CAATGGACTG
TTCAAGGCGC GGACGTCTTT CATCTATACC GAGACCCGTG GGGATGTGCT TGAACGCTAT
TCGGGATGGG CGTCGCACGA CCTGATCGAG AGCGATGGTC ACCTGAAAAT CAAGCTGAAG
CGGATCGATC TCGTCAATTT CGACGCTCCG TTCGGCAACA TCCAGCTCTT CATGTGA
 
Protein sequence
MITEKSITDF IYREAELLDT MQWDAWLALF HASGRYWMPL EWQQQDPVLQ PSLMYEDLLL 
LKVRVERLAG ERTFSQKPKS RCHHLLQAPT ITACDPANGL FKARTSFIYT ETRGDVLERY
SGWASHDLIE SDGHLKIKLK RIDLVNFDAP FGNIQLFM