113 homologs were found in PanDaTox collection
for query gene Vapar_6078 on replicon NC_012792
Organism: Variovorax paradoxus S110



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012792  Vapar_6078  protein of unknown function DUF899 thioredoxin family protein  100 
 
 
265 aa  552  1e-156  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_010625  Bphy_7225  protein of unknown function DUF899 thioredoxin family protein  83.01 
 
 
261 aa  463  1e-129  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_2487  protein of unknown function DUF899 thioredoxin family protein  82.58 
 
 
262 aa  456  1e-127  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_1280  protein of unknown function DUF899 thioredoxin family protein  83.73 
 
 
253 aa  447  1e-125  Sinorhizobium medicae WSM419  Bacteria  normal  0.127918  normal  0.405689 
 
 
-
 
NC_011369  Rleg2_2194  protein of unknown function DUF899 thioredoxin family protein  79.92 
 
 
261 aa  441  1e-123  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.167209  normal  0.0853422 
 
 
-
 
NC_008009  Acid345_1333  protein of unknown function DUF899, thioredoxin-like  73.6 
 
 
266 aa  395  1e-109  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.726839  normal 
 
 
-
 
NC_013739  Cwoe_0865  protein of unknown function DUF899 thioredoxin family protein  74.55 
 
 
223 aa  356  1.9999999999999998e-97  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_1142  protein of unknown function DUF899, thioredoxin-like protein  69.37 
 
 
231 aa  335  5.999999999999999e-91  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_1159  protein of unknown function DUF899, thioredoxin family protein  69.37 
 
 
231 aa  335  5.999999999999999e-91  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_1169  protein of unknown function DUF899, thioredoxin family protein  68.92 
 
 
231 aa  334  1e-90  Mycobacterium sp. JLS  Bacteria  normal  0.768824  normal  0.199001 
 
 
-
 
NC_008726  Mvan_0692  protein of unknown function DUF899, thioredoxin family protein  62.05 
 
 
241 aa  297  1e-79  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.0179397 
 
 
-
 
NC_009380  Strop_2736  protein of unknown function DUF899, thioredoxin family protein  53.78 
 
 
222 aa  248  5e-65  Salinispora tropica CNB-440  Bacteria  normal  0.0311425  normal  0.559549 
 
 
-
 
NC_008146  Mmcs_3906  protein of unknown function DUF899, thioredoxin-like protein  47.79 
 
 
223 aa  205  8e-52  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_3980  protein of unknown function DUF899, thioredoxin family protein  47.79 
 
 
223 aa  205  8e-52  Mycobacterium sp. KMS  Bacteria  normal  0.590341  normal 
 
 
-
 
NC_009077  Mjls_3921  protein of unknown function DUF899, thioredoxin family protein  47.35 
 
 
223 aa  202  4e-51  Mycobacterium sp. JLS  Bacteria  normal  0.0512344  normal  0.178262 
 
 
-
 
NC_009338  Mflv_2284  protein of unknown function DUF899, thioredoxin family protein  46.7 
 
 
224 aa  198  9e-50  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.41995 
 
 
-
 
NC_008726  Mvan_4382  protein of unknown function DUF899, thioredoxin family protein  44.54 
 
 
224 aa  189  2.9999999999999997e-47  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_4114  protein of unknown function DUF899 thioredoxin family protein  45.15 
 
 
232 aa  185  6e-46  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_0313  protein of unknown function DUF899, thioredoxin family protein  43.67 
 
 
234 aa  180  2.9999999999999997e-44  Streptosporangium roseum DSM 43021  Bacteria  normal  0.316291  normal 
 
 
-
 
NC_009439  Pmen_1335  protein of unknown function DUF899, thioredoxin family protein  39.13 
 
 
260 aa  171  2e-41  Pseudomonas mendocina ymp  Bacteria  normal  0.146435  normal 
 
 
-
 
NC_013739  Cwoe_4051  protein of unknown function DUF899 thioredoxin family protein  46.52 
 
 
238 aa  169  3e-41  Conexibacter woesei DSM 14684  Bacteria  normal  0.541879  normal 
 
 
-
 
NC_010571  Oter_1120  protein of unknown function DUF899 thioredoxin family protein  42.75 
 
 
255 aa  164  1.0000000000000001e-39  Opitutus terrae PB90-1  Bacteria  normal  0.845811  normal 
 
 
-
 
NC_013093  Amir_4093  protein of unknown function DUF899 thioredoxin family protein  39.84 
 
 
257 aa  161  1e-38  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_2851  hypothetical protein  40.82 
 
 
242 aa  160  3e-38  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_1368  protein of unknown function DUF899, thioredoxin-like  38.02 
 
 
273 aa  159  6e-38  Polaromonas sp. JS666  Bacteria  normal  normal  0.836068 
 
 
-
 
NC_007948  Bpro_0083  protein of unknown function DUF899, thioredoxin-like  39.83 
 
 
265 aa  157  1e-37  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_2423  protein of unknown function DUF899 thioredoxin family protein  39.84 
 
 
240 aa  157  2e-37  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_4033  hypothetical protein  39.11 
 
 
249 aa  156  3e-37  Pseudomonas aeruginosa PA7  Bacteria  normal  0.179526  n/a   
 
 
-
 
NC_010681  Bphyt_1526  protein of unknown function DUF899 thioredoxin family protein  39.83 
 
 
245 aa  156  3e-37  Burkholderia phytofirmans PsJN  Bacteria  normal  0.899756  normal 
 
 
-
 
NC_013947  Snas_6291  hypothetical protein  37.07 
 
 
260 aa  154  1e-36  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_1073  protein of unknown function DUF899 thioredoxin family protein  37.55 
 
 
241 aa  150  1e-35  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_2930  protein of unknown function DUF899 thioredoxin family protein  42.04 
 
 
242 aa  151  1e-35  Pseudomonas putida GB-1  Bacteria  normal  0.0915809  normal 
 
 
-
 
NC_010338  Caul_2485  protein of unknown function DUF899 thioredoxin family protein  39.68 
 
 
245 aa  151  1e-35  Caulobacter sp. K31  Bacteria  normal  0.267783  normal 
 
 
-
 
NC_009972  Haur_4695  protein of unknown function DUF899 thioredoxin family protein  40.2 
 
 
265 aa  150  3e-35  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_46820  hypothetical protein  37.75 
 
 
249 aa  149  4e-35  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0659228  decreased coverage  0.000000227534 
 
 
-
 
NC_009338  Mflv_3255  protein of unknown function DUF899, thioredoxin family protein  40.09 
 
 
231 aa  147  2.0000000000000003e-34  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_0955  protein of unknown function DUF899 thioredoxin family protein  36.43 
 
 
255 aa  147  2.0000000000000003e-34  Ralstonia pickettii 12J  Bacteria  decreased coverage  0.000224117  normal  0.0204099 
 
 
-
 
NC_009512  Pput_2838  protein of unknown function DUF899, thioredoxin family protein  40.82 
 
 
242 aa  145  5e-34  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_009668  Oant_4055  protein of unknown function DUF899 thioredoxin family protein  39.81 
 
 
236 aa  145  7.0000000000000006e-34  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_0816  protein of unknown function DUF899 thioredoxin family protein  40.27 
 
 
242 aa  144  1e-33  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  decreased coverage  0.00565144  normal  0.265134 
 
 
-
 
NC_012792  Vapar_6317  protein of unknown function DUF899 thioredoxin family protein  37.96 
 
 
265 aa  144  1e-33  Variovorax paradoxus S110  Bacteria  normal  0.645433  n/a   
 
 
-
 
NC_008254  Meso_0994  protein of unknown function DUF899, thioredoxin-like  39.81 
 
 
230 aa  144  2e-33  Chelativorans sp. BNC1  Bacteria  normal  0.617473  n/a   
 
 
-
 
NC_012856  Rpic12D_1052  protein of unknown function DUF899 thioredoxin family protein  39.46 
 
 
244 aa  143  2e-33  Ralstonia pickettii 12D  Bacteria  decreased coverage  0.0000759433  normal  0.0411864 
 
 
-
 
NC_003295  RSc1113  hypothetical protein  38.57 
 
 
244 aa  143  3e-33  Ralstonia solanacearum GMI1000  Bacteria  hitchhiker  0.0000287552  normal  0.212062 
 
 
-
 
NC_013172  Bfae_00900  hypothetical protein  38.81 
 
 
232 aa  143  3e-33  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_009668  Oant_3485  protein of unknown function DUF899 thioredoxin family protein  40.37 
 
 
241 aa  143  3e-33  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.895959  n/a   
 
 
-
 
NC_010622  Bphy_1818  protein of unknown function DUF899 thioredoxin family protein  36.4 
 
 
258 aa  143  3e-33  Burkholderia phymatum STM815  Bacteria  normal  normal  0.229326 
 
 
-
 
NC_013131  Caci_2142  protein of unknown function DUF899 thioredoxin family protein  35.29 
 
 
239 aa  143  3e-33  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0282  protein of unknown function DUF899 thioredoxin family protein  39.09 
 
 
233 aa  143  3e-33  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.0258482 
 
 
-
 
NC_008146  Mmcs_0337  protein of unknown function DUF899, thioredoxin-like protein  39.25 
 
 
229 aa  142  8e-33  Mycobacterium sp. MCS  Bacteria  normal  0.0510576  n/a   
 
 
-
 
NC_008705  Mkms_0347  protein of unknown function DUF899, thioredoxin family protein  39.25 
 
 
229 aa  142  8e-33  Mycobacterium sp. KMS  Bacteria  normal  normal  0.33372 
 
 
-
 
NC_007777  Francci3_1617  protein of unknown function DUF899, thioredoxin-like  37.72 
 
 
260 aa  141  9.999999999999999e-33  Frankia sp. CcI3  Bacteria  normal  0.780287  normal  0.292856 
 
 
-
 
NC_009921  Franean1_4042  protein of unknown function DUF899 thioredoxin family protein  39.15 
 
 
260 aa  141  9.999999999999999e-33  Frankia sp. EAN1pec  Bacteria  normal  normal  0.0967044 
 
 
-
 
NC_013757  Gobs_2314  protein of unknown function DUF899 thioredoxin family protein  38.25 
 
 
260 aa  139  3e-32  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_3564  protein of unknown function DUF899 thioredoxin family protein  37.56 
 
 
229 aa  140  3e-32  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.236943  n/a   
 
 
-
 
NC_007492  Pfl01_1441  hypothetical protein  39.63 
 
 
244 aa  139  3.9999999999999997e-32  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_2972  protein of unknown function DUF899, thioredoxin family protein  37.85 
 
 
228 aa  139  3.9999999999999997e-32  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.169644  normal  0.281677 
 
 
-
 
NC_008687  Pden_3150  protein of unknown function DUF899, thioredoxin family protein  36.21 
 
 
228 aa  139  4.999999999999999e-32  Paracoccus denitrificans PD1222  Bacteria  normal  0.3957  normal 
 
 
-
 
NC_009077  Mjls_0326  protein of unknown function DUF899, thioredoxin family protein  38.79 
 
 
229 aa  139  7e-32  Mycobacterium sp. JLS  Bacteria  normal  normal  0.497022 
 
 
-
 
NC_012850  Rleg_0929  protein of unknown function DUF899 thioredoxin family protein  39.37 
 
 
242 aa  138  7.999999999999999e-32  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.312824  normal  0.683768 
 
 
-
 
NC_013132  Cpin_5073  protein of unknown function DUF899 thioredoxin family protein  39.63 
 
 
257 aa  137  1e-31  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.309281 
 
 
-
 
NC_009511  Swit_4847  protein of unknown function DUF899, thioredoxin family protein  35.95 
 
 
232 aa  135  8e-31  Sphingomonas wittichii RW1  Bacteria  normal  0.890001  normal 
 
 
-
 
NC_009719  Plav_0967  protein of unknown function DUF899 thioredoxin family protein  36.82 
 
 
266 aa  134  9.999999999999999e-31  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_1510  protein of unknown function DUF899,thioredoxin-like  35.55 
 
 
267 aa  133  3e-30  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.0290677  n/a   
 
 
-
 
NC_009511  Swit_4488  protein of unknown function DUF899, thioredoxin family protein  38.46 
 
 
246 aa  132  6e-30  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.394996 
 
 
-
 
NC_013037  Dfer_2074  protein of unknown function DUF899 thioredoxin family protein  40.09 
 
 
258 aa  129  4.0000000000000003e-29  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_22490  hypothetical protein  35.68 
 
 
256 aa  124  1e-27  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_012856  Rpic12D_1377  protein of unknown function DUF899 thioredoxin family protein  31.6 
 
 
256 aa  113  4.0000000000000004e-24  Ralstonia pickettii 12D  Bacteria  normal  0.349929  normal 
 
 
-
 
NC_010682  Rpic_1313  protein of unknown function DUF899 thioredoxin family protein  31.23 
 
 
256 aa  112  5e-24  Ralstonia pickettii 12J  Bacteria  normal  normal  0.603997 
 
 
-
 
NC_009074  BURPS668_2407  hypothetical protein  33.33 
 
 
254 aa  110  2.0000000000000002e-23  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_0616  protein of unknown function DUF899 thioredoxin family protein  36.67 
 
 
244 aa  109  4.0000000000000004e-23  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_010084  Bmul_1283  protein of unknown function DUF899 thioredoxin family protein  32.22 
 
 
254 aa  108  6e-23  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.0515883  normal  0.391418 
 
 
-
 
NC_007434  BURPS1710b_2551  hypothetical protein  32.96 
 
 
254 aa  108  8.000000000000001e-23  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B0544  hypothetical protein  31.94 
 
 
255 aa  107  1e-22  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.457717 
 
 
-
 
NC_009076  BURPS1106A_2459  hypothetical protein  32.96 
 
 
254 aa  108  1e-22  Burkholderia pseudomallei 1106a  Bacteria  normal  0.0588117  n/a   
 
 
-
 
NC_007651  BTH_I2055  hypothetical protein  32.09 
 
 
254 aa  107  2e-22  Burkholderia thailandensis E264  Bacteria  normal  0.478815  n/a   
 
 
-
 
NC_006348  BMA1526  hypothetical protein  32.22 
 
 
254 aa  105  8e-22  Burkholderia mallei ATCC 23344  Bacteria  normal  0.153792  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2026  hypothetical protein  32.22 
 
 
254 aa  105  8e-22  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A3286  hypothetical protein  32.22 
 
 
254 aa  105  8e-22  Burkholderia mallei NCTC 10229  Bacteria  normal  0.0189775  n/a   
 
 
-
 
NC_009080  BMA10247_1297  hypothetical protein  32.22 
 
 
254 aa  105  8e-22  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_010676  Bphyt_4116  protein of unknown function DUF899 thioredoxin family protein  32.06 
 
 
255 aa  105  8e-22  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007510  Bcep18194_A5303  protein of unknown function DUF899, thioredoxin-like  31.85 
 
 
254 aa  105  9e-22  Burkholderia sp. 383  Bacteria  normal  0.789513  normal  0.132054 
 
 
-
 
NC_007953  Bxe_C0023  hypothetical protein  41.33 
 
 
253 aa  104  1e-21  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.428755 
 
 
-
 
NC_008390  Bamb_2026  protein of unknown function DUF899, thioredoxin family protein  32.43 
 
 
254 aa  103  4e-21  Burkholderia ambifaria AMMD  Bacteria  normal  0.517928  n/a   
 
 
-
 
NC_008062  Bcen_6084  protein of unknown function DUF899, thioredoxin-like  31.48 
 
 
254 aa  102  5e-21  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.766101  n/a   
 
 
-
 
NC_008542  Bcen2424_1993  protein of unknown function DUF899, thioredoxin family protein  31.48 
 
 
254 aa  102  5e-21  Burkholderia cenocepacia HI2424  Bacteria  normal  0.255854  n/a   
 
 
-
 
NC_010508  Bcenmc03_2013  protein of unknown function DUF899 thioredoxin family protein  31.48 
 
 
254 aa  102  5e-21  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0767296  normal 
 
 
-
 
NC_008009  Acid345_1332  protein of unknown function DUF899, thioredoxin-like  30.18 
 
 
272 aa  102  9e-21  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_010551  BamMC406_1895  protein of unknown function DUF899 thioredoxin family protein  31.66 
 
 
254 aa  102  9e-21  Burkholderia ambifaria MC40-6  Bacteria  normal  0.814935  normal 
 
 
-
 
NC_009485  BBta_6459  hypothetical protein  42.25 
 
 
253 aa  101  1e-20  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.335869  normal  0.619063 
 
 
-
 
NC_009636  Smed_0353  protein of unknown function DUF899 thioredoxin family protein  32.31 
 
 
255 aa  99.8  4e-20  Sinorhizobium medicae WSM419  Bacteria  decreased coverage  0.00646248  normal  0.96044 
 
 
-
 
NC_010625  Bphy_6464  protein of unknown function DUF899 thioredoxin family protein  38.34 
 
 
256 aa  97.4  2e-19  Burkholderia phymatum STM815  Bacteria  normal  normal  0.586164 
 
 
-
 
NC_012850  Rleg_2672  protein of unknown function DUF899 thioredoxin family protein  29.08 
 
 
265 aa  92  9e-18  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.087051  normal 
 
 
-
 
NC_011369  Rleg2_2342  protein of unknown function DUF899 thioredoxin family protein  39.44 
 
 
265 aa  91.7  1e-17  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.140568 
 
 
-
 
NC_007974  Rmet_5691  Thioredoxin-(TRX) like protein  30.15 
 
 
257 aa  85.1  0.000000000000001  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_012858  Rleg_6928  protein of unknown function DUF899 thioredoxin family protein  29.33 
 
 
233 aa  65.1  0.000000001  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.135694  normal 
 
 
-
 
NC_011366  Rleg2_5933  protein of unknown function DUF899 thioredoxin family protein  29.33 
 
 
233 aa  63.9  0.000000003  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.10378  normal  0.102215 
 
 
-
 
NC_007778  RPB_3245  hypothetical protein  29.61 
 
 
231 aa  56.2  0.0000006  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_1983  protein of unknown function DUF899 thioredoxin family protein  29.9 
 
 
235 aa  54.3  0.000002  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_2218  protein of unknown function DUF899, thioredoxin-like  27.54 
 
 
231 aa  52.8  0.000006  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.797158  normal  0.442221 
 
 
-
 
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