Gene Rpic_1313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1313 
Symbol 
ID6287316 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1408365 
End bp1409135 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content63% 
IMG OID642624883 
Productprotein of unknown function DUF899 thioredoxin family protein 
Protein accessionYP_001898889 
Protein GI187928402 
COG category[S] Function unknown 
COG ID[COG4312] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.603997 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGCAA CACACCCCAC AGCAACCCGC GCAACCTGGC TGGCAGAGCG CATTGAACTG 
CTCAAGGCCG AGAAGGAACT CACGCGCCGT AGCGACGAAC TCGCGCGCCG CAGGCAGGCA
CTGCCGTGGG TGCGCATCGA CAAAAGCTAC CGCTTTGAAA CCGAGAATGG CAGCGCGACG
CTTGCCGATC TGTTTGGCGG ACGTTCGCAA CTGCTGGTCT ATCACTTCAT GTTCGGGCCG
GACTACAAGG CGGGCTGCCC ATCGTGCTCG ATGATCGCTG ACGGCTTTGA CGGCTTTGTC
ACGCATCTGG CGAACCACGA CGTCACCCTG CTGGCGGTGT CGCGCGGGCC GCTGGCCAAG
TTGATCGAGT ATCGCGAGCG GATGGGCTGG AGCTTTCCGT GGGCATCATC GGTGGGTAGC
GATTTCAACT ACGATTTCAA CGTCTCGATC TCGGAAGAGC AACAGCGCGC CGGCAGCGCC
GACTACAACT ACGTGCGCGG CAGCCACGTG ATGGATGCAT CCGACTTGCC CGAACCCGTG
CAGCAGTTCG CCAGCATGTG CGGCACCGAT GCGCCCACCT ACGTGCGCGA CCGGCCCGGC
ATGAGTGCGT TCGTGCTGGA AGACGGCGTC GTGTATCACA CGTATTCCAC GTACGCGCGC
GGGCTCGACG GCTTGTGGGG CGCATACCAG TGGCTGGACC GCGCGCCGCT GGGCCGCAAC
GAAACCGGTG TCTGGTGGCG TCGCCATGAC GAATACGCTC AGCAACGTTG A
 
Protein sequence
MSATHPTATR ATWLAERIEL LKAEKELTRR SDELARRRQA LPWVRIDKSY RFETENGSAT 
LADLFGGRSQ LLVYHFMFGP DYKAGCPSCS MIADGFDGFV THLANHDVTL LAVSRGPLAK
LIEYRERMGW SFPWASSVGS DFNYDFNVSI SEEQQRAGSA DYNYVRGSHV MDASDLPEPV
QQFASMCGTD APTYVRDRPG MSAFVLEDGV VYHTYSTYAR GLDGLWGAYQ WLDRAPLGRN
ETGVWWRRHD EYAQQR