Gene Amir_4093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_4093 
Symbol 
ID8328286 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp4810239 
End bp4811012 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content71% 
IMG OID644944558 
Productprotein of unknown function DUF899 thioredoxin family protein 
Protein accessionYP_003101795 
Protein GI256378135 
COG category[S] Function unknown 
COG ID[COG4312] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGACC CGGAGATCGT GACCCGCGAG CAGTGGCGGG CGGCCCGCCT CGAACTGCTC 
GCCGAGGAGA AGGAGCTGAC CAAGCACCGC GACCGGGTCA ACGAGGCCCG GCGCAGGCTG
CCCATGGTCG AGGTGACCGA GGACTACCGC TTCCAGGGCC CGGAGGGCGA GCTGACCCTG
CTCGACCTGT TCGACGGCCG CCGCCAGCTG CTCGTGCACC ACGTGATGTT CGGGCCCGAG
GCCGACGCCG CCTGCCCGTC CTGCTCGTTC TGGCAGGACT GCGTCGGCGA CCTGACCCAC
CTGCACGCGC GCAGCACCAC GCTCGTCGCG GTCTCGCGCG CGCCGCTGCC CAAGCTCCAG
GCGTACCGGG AGCGGATGGG CTGGCACGTG CCCTGGTACT CCTCGCACGG CAGCATGTTC
AACTACGACT ACCACGCCAG CTTCGACGCC TCGATCGCCC CGGTGGAGTG GAACTACCGG
AGCTACGAGG AGCTGGTGCG GATGAACCCC GGCTGGGAGA ACTGGTCGGG GGAGGAGCAG
GGCGTCAGCG CGTTCCTGCG GCAGGGGGAC CGGGTGTTCC ACACCTACTC CTGCTACGGC
CGGGGCGACG ACCTGCTCAA CACCACCTAC AACTGGCTCG ACCTGACCGC CCTCGGCCGC
CAGGAGGGCT GGGAGAAGCC CGAGGGGCGC GGCTCCGGCC CGTTCATGGG CTGGTTGCGC
AGGCACGACG AGTACGACCC CGAGGTGATC GCGGGCGCGC GCGACCGCGC CTAG
 
Protein sequence
MTDPEIVTRE QWRAARLELL AEEKELTKHR DRVNEARRRL PMVEVTEDYR FQGPEGELTL 
LDLFDGRRQL LVHHVMFGPE ADAACPSCSF WQDCVGDLTH LHARSTTLVA VSRAPLPKLQ
AYRERMGWHV PWYSSHGSMF NYDYHASFDA SIAPVEWNYR SYEELVRMNP GWENWSGEEQ
GVSAFLRQGD RVFHTYSCYG RGDDLLNTTY NWLDLTALGR QEGWEKPEGR GSGPFMGWLR
RHDEYDPEVI AGARDRA