114 homologs were found in PanDaTox collection
for query gene Vapar_6317 on replicon NC_012792
Organism: Variovorax paradoxus S110



Page 1 of 2    << first  < prev  1  2    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012792  Vapar_6317  protein of unknown function DUF899 thioredoxin family protein  100 
 
 
265 aa  556  1e-158  Variovorax paradoxus S110  Bacteria  normal  0.645433  n/a   
 
 
-
 
NC_007948  Bpro_0083  protein of unknown function DUF899, thioredoxin-like  70.19 
 
 
265 aa  398  9.999999999999999e-111  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_008254  Meso_0994  protein of unknown function DUF899, thioredoxin-like  66.24 
 
 
230 aa  325  4.0000000000000003e-88  Chelativorans sp. BNC1  Bacteria  normal  0.617473  n/a   
 
 
-
 
NC_009668  Oant_4055  protein of unknown function DUF899 thioredoxin family protein  62.66 
 
 
236 aa  306  3e-82  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_0955  protein of unknown function DUF899 thioredoxin family protein  53.05 
 
 
255 aa  295  4e-79  Ralstonia pickettii 12J  Bacteria  decreased coverage  0.000224117  normal  0.0204099 
 
 
-
 
NC_010622  Bphy_1818  protein of unknown function DUF899 thioredoxin family protein  54.94 
 
 
258 aa  293  2e-78  Burkholderia phymatum STM815  Bacteria  normal  normal  0.229326 
 
 
-
 
NC_007948  Bpro_1368  protein of unknown function DUF899, thioredoxin-like  52.24 
 
 
273 aa  287  1e-76  Polaromonas sp. JS666  Bacteria  normal  normal  0.836068 
 
 
-
 
NC_003295  RSc1113  hypothetical protein  54.55 
 
 
244 aa  285  7e-76  Ralstonia solanacearum GMI1000  Bacteria  hitchhiker  0.0000287552  normal  0.212062 
 
 
-
 
NC_012856  Rpic12D_1052  protein of unknown function DUF899 thioredoxin family protein  54.51 
 
 
244 aa  284  1.0000000000000001e-75  Ralstonia pickettii 12D  Bacteria  decreased coverage  0.0000759433  normal  0.0411864 
 
 
-
 
NC_011369  Rleg2_0816  protein of unknown function DUF899 thioredoxin family protein  54.22 
 
 
242 aa  281  5.000000000000001e-75  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  decreased coverage  0.00565144  normal  0.265134 
 
 
-
 
NC_008463  PA14_46820  hypothetical protein  53.15 
 
 
249 aa  281  9e-75  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0659228  decreased coverage  0.000000227534 
 
 
-
 
NC_012850  Rleg_0929  protein of unknown function DUF899 thioredoxin family protein  54.62 
 
 
242 aa  278  5e-74  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.312824  normal  0.683768 
 
 
-
 
NC_009656  PSPA7_4033  hypothetical protein  52.36 
 
 
249 aa  276  2e-73  Pseudomonas aeruginosa PA7  Bacteria  normal  0.179526  n/a   
 
 
-
 
NC_013132  Cpin_5073  protein of unknown function DUF899 thioredoxin family protein  50.38 
 
 
257 aa  273  3e-72  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.309281 
 
 
-
 
NC_010681  Bphyt_1526  protein of unknown function DUF899 thioredoxin family protein  52.24 
 
 
245 aa  271  1e-71  Burkholderia phytofirmans PsJN  Bacteria  normal  0.899756  normal 
 
 
-
 
NC_009511  Swit_4488  protein of unknown function DUF899, thioredoxin family protein  51.95 
 
 
246 aa  270  2e-71  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.394996 
 
 
-
 
NC_009668  Oant_3485  protein of unknown function DUF899 thioredoxin family protein  51.2 
 
 
241 aa  267  2e-70  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.895959  n/a   
 
 
-
 
NC_010338  Caul_2485  protein of unknown function DUF899 thioredoxin family protein  53.33 
 
 
245 aa  261  6.999999999999999e-69  Caulobacter sp. K31  Bacteria  normal  0.267783  normal 
 
 
-
 
NC_007492  Pfl01_1441  hypothetical protein  48.82 
 
 
244 aa  258  7e-68  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_013037  Dfer_2074  protein of unknown function DUF899 thioredoxin family protein  49.81 
 
 
258 aa  256  4e-67  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_2851  hypothetical protein  49.4 
 
 
242 aa  249  2e-65  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_2930  protein of unknown function DUF899 thioredoxin family protein  48.24 
 
 
242 aa  243  1.9999999999999999e-63  Pseudomonas putida GB-1  Bacteria  normal  0.0915809  normal 
 
 
-
 
NC_009719  Plav_1073  protein of unknown function DUF899 thioredoxin family protein  48.22 
 
 
241 aa  243  3e-63  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_2423  protein of unknown function DUF899 thioredoxin family protein  48.18 
 
 
240 aa  243  3e-63  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_0616  protein of unknown function DUF899 thioredoxin family protein  50 
 
 
244 aa  234  7e-61  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_2838  protein of unknown function DUF899, thioredoxin family protein  49 
 
 
242 aa  234  9e-61  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_008062  Bcen_6084  protein of unknown function DUF899, thioredoxin-like  48.26 
 
 
254 aa  233  2.0000000000000002e-60  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.766101  n/a   
 
 
-
 
NC_008542  Bcen2424_1993  protein of unknown function DUF899, thioredoxin family protein  48.26 
 
 
254 aa  233  2.0000000000000002e-60  Burkholderia cenocepacia HI2424  Bacteria  normal  0.255854  n/a   
 
 
-
 
NC_010508  Bcenmc03_2013  protein of unknown function DUF899 thioredoxin family protein  48.26 
 
 
254 aa  233  2.0000000000000002e-60  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0767296  normal 
 
 
-
 
NC_010676  Bphyt_4116  protein of unknown function DUF899 thioredoxin family protein  47.67 
 
 
255 aa  233  3e-60  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_008687  Pden_3150  protein of unknown function DUF899, thioredoxin family protein  49.36 
 
 
228 aa  229  5e-59  Paracoccus denitrificans PD1222  Bacteria  normal  0.3957  normal 
 
 
-
 
NC_007510  Bcep18194_A5303  protein of unknown function DUF899, thioredoxin-like  47.88 
 
 
254 aa  228  6e-59  Burkholderia sp. 383  Bacteria  normal  0.789513  normal  0.132054 
 
 
-
 
NC_008390  Bamb_2026  protein of unknown function DUF899, thioredoxin family protein  47.88 
 
 
254 aa  228  1e-58  Burkholderia ambifaria AMMD  Bacteria  normal  0.517928  n/a   
 
 
-
 
NC_007434  BURPS1710b_2551  hypothetical protein  48.06 
 
 
254 aa  226  2e-58  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_010551  BamMC406_1895  protein of unknown function DUF899 thioredoxin family protein  47.49 
 
 
254 aa  226  4e-58  Burkholderia ambifaria MC40-6  Bacteria  normal  0.814935  normal 
 
 
-
 
NC_009076  BURPS1106A_2459  hypothetical protein  47.67 
 
 
254 aa  224  1e-57  Burkholderia pseudomallei 1106a  Bacteria  normal  0.0588117  n/a   
 
 
-
 
NC_010084  Bmul_1283  protein of unknown function DUF899 thioredoxin family protein  46.72 
 
 
254 aa  224  1e-57  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.0515883  normal  0.391418 
 
 
-
 
NC_007952  Bxe_B0544  hypothetical protein  46.69 
 
 
255 aa  223  4e-57  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.457717 
 
 
-
 
NC_009074  BURPS668_2407  hypothetical protein  47.31 
 
 
254 aa  223  4e-57  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009511  Swit_4847  protein of unknown function DUF899, thioredoxin family protein  48.31 
 
 
232 aa  222  4.9999999999999996e-57  Sphingomonas wittichii RW1  Bacteria  normal  0.890001  normal 
 
 
-
 
NC_006348  BMA1526  hypothetical protein  47.29 
 
 
254 aa  221  6e-57  Burkholderia mallei ATCC 23344  Bacteria  normal  0.153792  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2026  hypothetical protein  47.29 
 
 
254 aa  221  6e-57  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A3286  hypothetical protein  47.29 
 
 
254 aa  221  6e-57  Burkholderia mallei NCTC 10229  Bacteria  normal  0.0189775  n/a   
 
 
-
 
NC_009080  BMA10247_1297  hypothetical protein  47.29 
 
 
254 aa  221  6e-57  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_1313  protein of unknown function DUF899 thioredoxin family protein  46.27 
 
 
256 aa  222  6e-57  Ralstonia pickettii 12J  Bacteria  normal  normal  0.603997 
 
 
-
 
NC_012856  Rpic12D_1377  protein of unknown function DUF899 thioredoxin family protein  45.88 
 
 
256 aa  221  9.999999999999999e-57  Ralstonia pickettii 12D  Bacteria  normal  0.349929  normal 
 
 
-
 
NC_007953  Bxe_C0023  hypothetical protein  45.38 
 
 
253 aa  219  3.9999999999999997e-56  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.428755 
 
 
-
 
NC_007651  BTH_I2055  hypothetical protein  46.12 
 
 
254 aa  218  6e-56  Burkholderia thailandensis E264  Bacteria  normal  0.478815  n/a   
 
 
-
 
NC_008009  Acid345_1332  protein of unknown function DUF899, thioredoxin-like  43.07 
 
 
272 aa  217  2e-55  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_6459  hypothetical protein  44.79 
 
 
253 aa  213  1.9999999999999998e-54  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.335869  normal  0.619063 
 
 
-
 
NC_010625  Bphy_6464  protein of unknown function DUF899 thioredoxin family protein  45.77 
 
 
256 aa  212  3.9999999999999995e-54  Burkholderia phymatum STM815  Bacteria  normal  normal  0.586164 
 
 
-
 
NC_013595  Sros_0313  protein of unknown function DUF899, thioredoxin family protein  48.33 
 
 
234 aa  212  5.999999999999999e-54  Streptosporangium roseum DSM 43021  Bacteria  normal  0.316291  normal 
 
 
-
 
NC_009636  Smed_0353  protein of unknown function DUF899 thioredoxin family protein  43.24 
 
 
255 aa  204  2e-51  Sinorhizobium medicae WSM419  Bacteria  decreased coverage  0.00646248  normal  0.96044 
 
 
-
 
NC_009077  Mjls_3921  protein of unknown function DUF899, thioredoxin family protein  46.89 
 
 
223 aa  202  3e-51  Mycobacterium sp. JLS  Bacteria  normal  0.0512344  normal  0.178262 
 
 
-
 
NC_008146  Mmcs_3906  protein of unknown function DUF899, thioredoxin-like protein  46.89 
 
 
223 aa  202  5e-51  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_3980  protein of unknown function DUF899, thioredoxin family protein  46.89 
 
 
223 aa  202  5e-51  Mycobacterium sp. KMS  Bacteria  normal  0.590341  normal 
 
 
-
 
NC_007974  Rmet_5691  Thioredoxin-(TRX) like protein  46.77 
 
 
257 aa  201  9.999999999999999e-51  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_4051  protein of unknown function DUF899 thioredoxin family protein  49.77 
 
 
238 aa  199  5e-50  Conexibacter woesei DSM 14684  Bacteria  normal  0.541879  normal 
 
 
-
 
NC_009719  Plav_0967  protein of unknown function DUF899 thioredoxin family protein  42.92 
 
 
266 aa  198  7.999999999999999e-50  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_1335  protein of unknown function DUF899, thioredoxin family protein  43.68 
 
 
260 aa  197  1.0000000000000001e-49  Pseudomonas mendocina ymp  Bacteria  normal  0.146435  normal 
 
 
-
 
NC_012850  Rleg_2672  protein of unknown function DUF899 thioredoxin family protein  43.91 
 
 
265 aa  193  3e-48  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.087051  normal 
 
 
-
 
NC_013093  Amir_4114  protein of unknown function DUF899 thioredoxin family protein  42.68 
 
 
232 aa  189  4e-47  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_2342  protein of unknown function DUF899 thioredoxin family protein  41.7 
 
 
265 aa  188  9e-47  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.140568 
 
 
-
 
NC_008726  Mvan_4382  protein of unknown function DUF899, thioredoxin family protein  41.91 
 
 
224 aa  184  9e-46  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_2284  protein of unknown function DUF899, thioredoxin family protein  42.74 
 
 
224 aa  181  8.000000000000001e-45  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.41995 
 
 
-
 
NC_009380  Strop_2736  protein of unknown function DUF899, thioredoxin family protein  46.98 
 
 
222 aa  177  2e-43  Salinispora tropica CNB-440  Bacteria  normal  0.0311425  normal  0.559549 
 
 
-
 
NC_013093  Amir_4093  protein of unknown function DUF899 thioredoxin family protein  43.36 
 
 
257 aa  174  1.9999999999999998e-42  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_1120  protein of unknown function DUF899 thioredoxin family protein  42.24 
 
 
255 aa  171  1e-41  Opitutus terrae PB90-1  Bacteria  normal  0.845811  normal 
 
 
-
 
NC_013739  Cwoe_0865  protein of unknown function DUF899 thioredoxin family protein  41.22 
 
 
223 aa  152  5e-36  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_0692  protein of unknown function DUF899, thioredoxin family protein  38.82 
 
 
241 aa  150  2e-35  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.0179397 
 
 
-
 
NC_012792  Vapar_6078  protein of unknown function DUF899 thioredoxin family protein  37.96 
 
 
265 aa  144  1e-33  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_1280  protein of unknown function DUF899 thioredoxin family protein  39.73 
 
 
253 aa  143  3e-33  Sinorhizobium medicae WSM419  Bacteria  normal  0.127918  normal  0.405689 
 
 
-
 
NC_010625  Bphy_7225  protein of unknown function DUF899 thioredoxin family protein  37.93 
 
 
261 aa  140  1.9999999999999998e-32  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_1142  protein of unknown function DUF899, thioredoxin-like protein  37.16 
 
 
231 aa  137  1e-31  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_1159  protein of unknown function DUF899, thioredoxin family protein  37.16 
 
 
231 aa  137  1e-31  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_1169  protein of unknown function DUF899, thioredoxin family protein  36.7 
 
 
231 aa  136  3.0000000000000003e-31  Mycobacterium sp. JLS  Bacteria  normal  0.768824  normal  0.199001 
 
 
-
 
NC_012850  Rleg_2487  protein of unknown function DUF899 thioredoxin family protein  36.84 
 
 
262 aa  137  3.0000000000000003e-31  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_2194  protein of unknown function DUF899 thioredoxin family protein  38.07 
 
 
261 aa  134  1.9999999999999998e-30  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.167209  normal  0.0853422 
 
 
-
 
NC_008009  Acid345_1333  protein of unknown function DUF899, thioredoxin-like  38.22 
 
 
266 aa  130  2.0000000000000002e-29  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.726839  normal 
 
 
-
 
NC_009972  Haur_4695  protein of unknown function DUF899 thioredoxin family protein  31.63 
 
 
265 aa  97.1  2e-19  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_6291  hypothetical protein  31.94 
 
 
260 aa  94  2e-18  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_0326  protein of unknown function DUF899, thioredoxin family protein  28.84 
 
 
229 aa  94  3e-18  Mycobacterium sp. JLS  Bacteria  normal  normal  0.497022 
 
 
-
 
NC_012669  Bcav_0282  protein of unknown function DUF899 thioredoxin family protein  29.44 
 
 
233 aa  93.2  4e-18  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.0258482 
 
 
-
 
NC_008146  Mmcs_0337  protein of unknown function DUF899, thioredoxin-like protein  28.84 
 
 
229 aa  92.8  5e-18  Mycobacterium sp. MCS  Bacteria  normal  0.0510576  n/a   
 
 
-
 
NC_008705  Mkms_0347  protein of unknown function DUF899, thioredoxin family protein  28.84 
 
 
229 aa  92.8  5e-18  Mycobacterium sp. KMS  Bacteria  normal  normal  0.33372 
 
 
-
 
NC_014158  Tpau_3564  protein of unknown function DUF899 thioredoxin family protein  30.28 
 
 
229 aa  92  8e-18  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.236943  n/a   
 
 
-
 
NC_009338  Mflv_3255  protein of unknown function DUF899, thioredoxin family protein  30.7 
 
 
231 aa  91.3  1e-17  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_00900  hypothetical protein  27.44 
 
 
232 aa  90.9  2e-17  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_011366  Rleg2_5933  protein of unknown function DUF899 thioredoxin family protein  30.88 
 
 
233 aa  89.4  6e-17  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.10378  normal  0.102215 
 
 
-
 
NC_012858  Rleg_6928  protein of unknown function DUF899 thioredoxin family protein  30.48 
 
 
233 aa  89.4  6e-17  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.135694  normal 
 
 
-
 
NC_009972  Haur_1510  protein of unknown function DUF899,thioredoxin-like  29.55 
 
 
267 aa  87.8  2e-16  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.0290677  n/a   
 
 
-
 
NC_009953  Sare_2183  protein of unknown function DUF899 thioredoxin family protein  28.07 
 
 
230 aa  85.5  7e-16  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.0511946 
 
 
-
 
NC_006349  BMAA0828  hypothetical protein  31.95 
 
 
236 aa  84  0.000000000000002  Burkholderia mallei ATCC 23344  Bacteria  hitchhiker  0.0000230425  n/a   
 
 
-
 
NC_007348  Reut_B4359  hypothetical protein  32.09 
 
 
232 aa  84.3  0.000000000000002  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_1617  protein of unknown function DUF899, thioredoxin-like  29.49 
 
 
260 aa  84.3  0.000000000000002  Frankia sp. CcI3  Bacteria  normal  0.780287  normal  0.292856 
 
 
-
 
NC_008835  BMA10229_0045  hypothetical protein  31.95 
 
 
236 aa  84  0.000000000000002  Burkholderia mallei NCTC 10229  Bacteria  hitchhiker  0.0000000000431681  n/a   
 
 
-
 
NC_009079  BMA10247_A1575  hypothetical protein  31.95 
 
 
236 aa  84  0.000000000000002  Burkholderia mallei NCTC 10247  Bacteria  hitchhiker  0.0000230171  n/a   
 
 
-
 
NC_013757  Gobs_2314  protein of unknown function DUF899 thioredoxin family protein  29.49 
 
 
260 aa  83.2  0.000000000000004  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_2972  protein of unknown function DUF899, thioredoxin family protein  27.91 
 
 
228 aa  83.2  0.000000000000004  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.169644  normal  0.281677 
 
 
-
 
NC_009921  Franean1_4042  protein of unknown function DUF899 thioredoxin family protein  29.49 
 
 
260 aa  83.2  0.000000000000004  Frankia sp. EAN1pec  Bacteria  normal  normal  0.0967044 
 
 
-
 
Page 1 of 2    << first  < prev  1  2    next >  last >>