| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6317 |
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| Symbol | |
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| ID | 7975639 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 1053485 |
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| End bp | 1054282 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644796887 |
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| Product | protein of unknown function DUF899 thioredoxin family protein |
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| Protein accession | YP_002948146 |
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| Protein GI | 239820961 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4312] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.645433 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACACCG CCATTGCCGA AAAGAGCACC GTGACAAACC ACCCCGTCGT CTCGAAGGAC
CGGTGGCTGG CCCGGCGCAA GGCGCTGCTG GCGCGCGAAA AGGAACTCAC GCACCTGCGC
GACCAGGTCG CTCGCGAGCG CCGCGCGCTG CCGTGGACCC GCGTCGAGAA GAACTACGTC
TTCGACACGC CCGAGGGCCC GCGCGCGTTG GCCGACCTGT TCGAAGGCCG CCGCCAATTG
CTGGTGCAGC ACTTCATGCT CGGCCCCGAT TGGGAGCAGG GCTGCCCGAG CTGTTCCTAC
ATGTCCGACC ACCTCGGCGG AATGAAGGTG CACCTGGAGA ACCGCGACGT CACGCTCTTG
GTCGTCTCGC GTGCACCGCT GGACCAGATC GAGCGCTTCC GCCGGCGCAT GGGCTGGGAG
TTCAAGTGGG TCTCGGCGCA CGGCAACGAC TTCAACTACG ACTTCAACGT GAGCTTCACG
CCGCAGCAGT GGGCCGAGGG CCAGGGCGAG GTCTACTACA ACTACGGCGT GCGGCCCTTC
CCGGCGCAGG AGGCCCCCGG CATCAGCGTG TTCTACAAGG GCGATGCGGG CGAGGTGTTC
CACACCTACT CGACCTACGA GCGCGGCGTC GAGGCAATGA TGGGCACCTA CAGCCTGCTC
GACCTCACGC CCAAGGGCCG CGACGAGCCC AACCCCGTCT ACGCGATGGA CTGGGTGCGC
CACCACGACC GCTACGAACC GGCACCGGCC GCAAAGCCGG CGGCCGCGGC GGGTTCGTGC
TGCCACGCGC CCGACTGA
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| Protein sequence | MNTAIAEKST VTNHPVVSKD RWLARRKALL AREKELTHLR DQVARERRAL PWTRVEKNYV
FDTPEGPRAL ADLFEGRRQL LVQHFMLGPD WEQGCPSCSY MSDHLGGMKV HLENRDVTLL
VVSRAPLDQI ERFRRRMGWE FKWVSAHGND FNYDFNVSFT PQQWAEGQGE VYYNYGVRPF
PAQEAPGISV FYKGDAGEVF HTYSTYERGV EAMMGTYSLL DLTPKGRDEP NPVYAMDWVR
HHDRYEPAPA AKPAAAAGSC CHAPD
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