114 homologs were found in PanDaTox collection
for query gene Smed_1280 on replicon NC_009636
Organism: Sinorhizobium medicae WSM419



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009636  Smed_1280  protein of unknown function DUF899 thioredoxin family protein  100 
 
 
253 aa  526  1e-148  Sinorhizobium medicae WSM419  Bacteria  normal  0.127918  normal  0.405689 
 
 
-
 
NC_012850  Rleg_2487  protein of unknown function DUF899 thioredoxin family protein  82.94 
 
 
262 aa  451  1.0000000000000001e-126  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_012792  Vapar_6078  protein of unknown function DUF899 thioredoxin family protein  83.73 
 
 
265 aa  447  1e-125  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_010625  Bphy_7225  protein of unknown function DUF899 thioredoxin family protein  83.61 
 
 
261 aa  445  1.0000000000000001e-124  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_2194  protein of unknown function DUF899 thioredoxin family protein  80.72 
 
 
261 aa  435  1e-121  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.167209  normal  0.0853422 
 
 
-
 
NC_008009  Acid345_1333  protein of unknown function DUF899, thioredoxin-like  72.76 
 
 
266 aa  393  1e-108  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.726839  normal 
 
 
-
 
NC_013739  Cwoe_0865  protein of unknown function DUF899 thioredoxin family protein  74.89 
 
 
223 aa  357  9.999999999999999e-98  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_1142  protein of unknown function DUF899, thioredoxin-like protein  66.07 
 
 
231 aa  334  7e-91  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_1159  protein of unknown function DUF899, thioredoxin family protein  66.07 
 
 
231 aa  334  7e-91  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_1169  protein of unknown function DUF899, thioredoxin family protein  65.62 
 
 
231 aa  333  1e-90  Mycobacterium sp. JLS  Bacteria  normal  0.768824  normal  0.199001 
 
 
-
 
NC_008726  Mvan_0692  protein of unknown function DUF899, thioredoxin family protein  63.18 
 
 
241 aa  308  8e-83  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.0179397 
 
 
-
 
NC_009380  Strop_2736  protein of unknown function DUF899, thioredoxin family protein  54.22 
 
 
222 aa  252  3e-66  Salinispora tropica CNB-440  Bacteria  normal  0.0311425  normal  0.559549 
 
 
-
 
NC_008146  Mmcs_3906  protein of unknown function DUF899, thioredoxin-like protein  47.09 
 
 
223 aa  212  4.9999999999999996e-54  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_3980  protein of unknown function DUF899, thioredoxin family protein  47.09 
 
 
223 aa  212  4.9999999999999996e-54  Mycobacterium sp. KMS  Bacteria  normal  0.590341  normal 
 
 
-
 
NC_009077  Mjls_3921  protein of unknown function DUF899, thioredoxin family protein  46.64 
 
 
223 aa  209  3e-53  Mycobacterium sp. JLS  Bacteria  normal  0.0512344  normal  0.178262 
 
 
-
 
NC_009338  Mflv_2284  protein of unknown function DUF899, thioredoxin family protein  46.85 
 
 
224 aa  207  1e-52  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.41995 
 
 
-
 
NC_008726  Mvan_4382  protein of unknown function DUF899, thioredoxin family protein  44.3 
 
 
224 aa  202  5e-51  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_4114  protein of unknown function DUF899 thioredoxin family protein  43.93 
 
 
232 aa  186  3e-46  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_0313  protein of unknown function DUF899, thioredoxin family protein  40.85 
 
 
234 aa  180  2e-44  Streptosporangium roseum DSM 43021  Bacteria  normal  0.316291  normal 
 
 
-
 
NC_013739  Cwoe_4051  protein of unknown function DUF899 thioredoxin family protein  46.72 
 
 
238 aa  179  4e-44  Conexibacter woesei DSM 14684  Bacteria  normal  0.541879  normal 
 
 
-
 
NC_009439  Pmen_1335  protein of unknown function DUF899, thioredoxin family protein  38.1 
 
 
260 aa  167  2e-40  Pseudomonas mendocina ymp  Bacteria  normal  0.146435  normal 
 
 
-
 
NC_010571  Oter_1120  protein of unknown function DUF899 thioredoxin family protein  40.98 
 
 
255 aa  165  8e-40  Opitutus terrae PB90-1  Bacteria  normal  0.845811  normal 
 
 
-
 
NC_013093  Amir_4093  protein of unknown function DUF899 thioredoxin family protein  40 
 
 
257 aa  162  4.0000000000000004e-39  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_0337  protein of unknown function DUF899, thioredoxin-like protein  41.12 
 
 
229 aa  160  1e-38  Mycobacterium sp. MCS  Bacteria  normal  0.0510576  n/a   
 
 
-
 
NC_008705  Mkms_0347  protein of unknown function DUF899, thioredoxin family protein  41.12 
 
 
229 aa  160  1e-38  Mycobacterium sp. KMS  Bacteria  normal  normal  0.33372 
 
 
-
 
NC_012669  Bcav_0282  protein of unknown function DUF899 thioredoxin family protein  41.12 
 
 
233 aa  160  2e-38  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.0258482 
 
 
-
 
NC_007948  Bpro_1368  protein of unknown function DUF899, thioredoxin-like  38.71 
 
 
273 aa  157  1e-37  Polaromonas sp. JS666  Bacteria  normal  normal  0.836068 
 
 
-
 
NC_009077  Mjls_0326  protein of unknown function DUF899, thioredoxin family protein  40.65 
 
 
229 aa  157  1e-37  Mycobacterium sp. JLS  Bacteria  normal  normal  0.497022 
 
 
-
 
NC_002947  PP_2851  hypothetical protein  39.59 
 
 
242 aa  157  2e-37  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_6291  hypothetical protein  35.37 
 
 
260 aa  157  2e-37  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_2972  protein of unknown function DUF899, thioredoxin family protein  38.64 
 
 
228 aa  157  2e-37  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.169644  normal  0.281677 
 
 
-
 
NC_009338  Mflv_3255  protein of unknown function DUF899, thioredoxin family protein  40.71 
 
 
231 aa  155  7e-37  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_2314  protein of unknown function DUF899 thioredoxin family protein  38.53 
 
 
260 aa  155  8e-37  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_4042  protein of unknown function DUF899 thioredoxin family protein  38.1 
 
 
260 aa  154  2e-36  Frankia sp. EAN1pec  Bacteria  normal  normal  0.0967044 
 
 
-
 
NC_007777  Francci3_1617  protein of unknown function DUF899, thioredoxin-like  37.66 
 
 
260 aa  152  4e-36  Frankia sp. CcI3  Bacteria  normal  0.780287  normal  0.292856 
 
 
-
 
NC_013172  Bfae_00900  hypothetical protein  39.25 
 
 
232 aa  152  4e-36  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_4033  hypothetical protein  40.44 
 
 
249 aa  151  1e-35  Pseudomonas aeruginosa PA7  Bacteria  normal  0.179526  n/a   
 
 
-
 
NC_010501  PputW619_2423  protein of unknown function DUF899 thioredoxin family protein  40.47 
 
 
240 aa  150  2e-35  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_2142  protein of unknown function DUF899 thioredoxin family protein  36.82 
 
 
239 aa  149  3e-35  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_0083  protein of unknown function DUF899, thioredoxin-like  41.01 
 
 
265 aa  148  7e-35  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_1073  protein of unknown function DUF899 thioredoxin family protein  38.91 
 
 
241 aa  147  2.0000000000000003e-34  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_2930  protein of unknown function DUF899 thioredoxin family protein  39.53 
 
 
242 aa  146  3e-34  Pseudomonas putida GB-1  Bacteria  normal  0.0915809  normal 
 
 
-
 
NC_009972  Haur_4695  protein of unknown function DUF899 thioredoxin family protein  35.84 
 
 
265 aa  146  4.0000000000000006e-34  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_1526  protein of unknown function DUF899 thioredoxin family protein  39.48 
 
 
245 aa  145  8.000000000000001e-34  Burkholderia phytofirmans PsJN  Bacteria  normal  0.899756  normal 
 
 
-
 
NC_010622  Bphy_1818  protein of unknown function DUF899 thioredoxin family protein  37.92 
 
 
258 aa  144  1e-33  Burkholderia phymatum STM815  Bacteria  normal  normal  0.229326 
 
 
-
 
NC_014158  Tpau_3564  protein of unknown function DUF899 thioredoxin family protein  38.89 
 
 
229 aa  143  3e-33  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.236943  n/a   
 
 
-
 
NC_012792  Vapar_6317  protein of unknown function DUF899 thioredoxin family protein  39.73 
 
 
265 aa  143  3e-33  Variovorax paradoxus S110  Bacteria  normal  0.645433  n/a   
 
 
-
 
NC_008687  Pden_3150  protein of unknown function DUF899, thioredoxin family protein  35.98 
 
 
228 aa  142  4e-33  Paracoccus denitrificans PD1222  Bacteria  normal  0.3957  normal 
 
 
-
 
NC_009512  Pput_2838  protein of unknown function DUF899, thioredoxin family protein  39.59 
 
 
242 aa  142  5e-33  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_2485  protein of unknown function DUF899 thioredoxin family protein  38.68 
 
 
245 aa  142  6e-33  Caulobacter sp. K31  Bacteria  normal  0.267783  normal 
 
 
-
 
NC_008463  PA14_46820  hypothetical protein  39.11 
 
 
249 aa  141  8e-33  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0659228  decreased coverage  0.000000227534 
 
 
-
 
NC_008254  Meso_0994  protein of unknown function DUF899, thioredoxin-like  38.43 
 
 
230 aa  140  1.9999999999999998e-32  Chelativorans sp. BNC1  Bacteria  normal  0.617473  n/a   
 
 
-
 
NC_011369  Rleg2_0816  protein of unknown function DUF899 thioredoxin family protein  39.91 
 
 
242 aa  140  1.9999999999999998e-32  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  decreased coverage  0.00565144  normal  0.265134 
 
 
-
 
NC_009972  Haur_1510  protein of unknown function DUF899,thioredoxin-like  37.07 
 
 
267 aa  139  3e-32  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.0290677  n/a   
 
 
-
 
NC_009668  Oant_4055  protein of unknown function DUF899 thioredoxin family protein  37.96 
 
 
236 aa  138  8.999999999999999e-32  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_012856  Rpic12D_1052  protein of unknown function DUF899 thioredoxin family protein  38.57 
 
 
244 aa  138  8.999999999999999e-32  Ralstonia pickettii 12D  Bacteria  decreased coverage  0.0000759433  normal  0.0411864 
 
 
-
 
NC_007492  Pfl01_1441  hypothetical protein  37.79 
 
 
244 aa  135  7.000000000000001e-31  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_5073  protein of unknown function DUF899 thioredoxin family protein  41.74 
 
 
257 aa  135  7.000000000000001e-31  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.309281 
 
 
-
 
NC_003295  RSc1113  hypothetical protein  36.77 
 
 
244 aa  133  1.9999999999999998e-30  Ralstonia solanacearum GMI1000  Bacteria  hitchhiker  0.0000287552  normal  0.212062 
 
 
-
 
NC_010682  Rpic_0955  protein of unknown function DUF899 thioredoxin family protein  35.63 
 
 
255 aa  134  1.9999999999999998e-30  Ralstonia pickettii 12J  Bacteria  decreased coverage  0.000224117  normal  0.0204099 
 
 
-
 
NC_012850  Rleg_0929  protein of unknown function DUF899 thioredoxin family protein  38.53 
 
 
242 aa  132  6e-30  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.312824  normal  0.683768 
 
 
-
 
NC_009719  Plav_0967  protein of unknown function DUF899 thioredoxin family protein  36.97 
 
 
266 aa  130  1.0000000000000001e-29  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_009668  Oant_3485  protein of unknown function DUF899 thioredoxin family protein  36.49 
 
 
241 aa  130  3e-29  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.895959  n/a   
 
 
-
 
NC_013172  Bfae_22490  hypothetical protein  37.5 
 
 
256 aa  129  6e-29  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_009511  Swit_4847  protein of unknown function DUF899, thioredoxin family protein  35.59 
 
 
232 aa  126  4.0000000000000003e-28  Sphingomonas wittichii RW1  Bacteria  normal  0.890001  normal 
 
 
-
 
NC_013037  Dfer_2074  protein of unknown function DUF899 thioredoxin family protein  38.05 
 
 
258 aa  120  3e-26  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_4488  protein of unknown function DUF899, thioredoxin family protein  34.84 
 
 
246 aa  118  7.999999999999999e-26  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.394996 
 
 
-
 
NC_007952  Bxe_B0544  hypothetical protein  33.59 
 
 
255 aa  116  3e-25  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.457717 
 
 
-
 
NC_013739  Cwoe_0616  protein of unknown function DUF899 thioredoxin family protein  35.89 
 
 
244 aa  116  3.9999999999999997e-25  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_010084  Bmul_1283  protein of unknown function DUF899 thioredoxin family protein  31.66 
 
 
254 aa  112  4.0000000000000004e-24  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.0515883  normal  0.391418 
 
 
-
 
NC_012856  Rpic12D_1377  protein of unknown function DUF899 thioredoxin family protein  30.83 
 
 
256 aa  112  5e-24  Ralstonia pickettii 12D  Bacteria  normal  0.349929  normal 
 
 
-
 
NC_008390  Bamb_2026  protein of unknown function DUF899, thioredoxin family protein  31.66 
 
 
254 aa  110  2.0000000000000002e-23  Burkholderia ambifaria AMMD  Bacteria  normal  0.517928  n/a   
 
 
-
 
NC_010676  Bphyt_4116  protein of unknown function DUF899 thioredoxin family protein  32.06 
 
 
255 aa  110  2.0000000000000002e-23  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_1313  protein of unknown function DUF899 thioredoxin family protein  30.08 
 
 
256 aa  110  3e-23  Ralstonia pickettii 12J  Bacteria  normal  normal  0.603997 
 
 
-
 
NC_010551  BamMC406_1895  protein of unknown function DUF899 thioredoxin family protein  30.89 
 
 
254 aa  108  6e-23  Burkholderia ambifaria MC40-6  Bacteria  normal  0.814935  normal 
 
 
-
 
NC_007434  BURPS1710b_2551  hypothetical protein  43.79 
 
 
254 aa  108  7.000000000000001e-23  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_2407  hypothetical protein  31.85 
 
 
254 aa  108  9.000000000000001e-23  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_2459  hypothetical protein  31.85 
 
 
254 aa  108  9.000000000000001e-23  Burkholderia pseudomallei 1106a  Bacteria  normal  0.0588117  n/a   
 
 
-
 
NC_006348  BMA1526  hypothetical protein  43.14 
 
 
254 aa  107  2e-22  Burkholderia mallei ATCC 23344  Bacteria  normal  0.153792  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2026  hypothetical protein  43.14 
 
 
254 aa  107  2e-22  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A3286  hypothetical protein  43.14 
 
 
254 aa  107  2e-22  Burkholderia mallei NCTC 10229  Bacteria  normal  0.0189775  n/a   
 
 
-
 
NC_009080  BMA10247_1297  hypothetical protein  43.14 
 
 
254 aa  107  2e-22  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_007510  Bcep18194_A5303  protein of unknown function DUF899, thioredoxin-like  30.89 
 
 
254 aa  104  1e-21  Burkholderia sp. 383  Bacteria  normal  0.789513  normal  0.132054 
 
 
-
 
NC_008009  Acid345_1332  protein of unknown function DUF899, thioredoxin-like  31.92 
 
 
272 aa  104  1e-21  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_007651  BTH_I2055  hypothetical protein  43.57 
 
 
254 aa  103  2e-21  Burkholderia thailandensis E264  Bacteria  normal  0.478815  n/a   
 
 
-
 
NC_008062  Bcen_6084  protein of unknown function DUF899, thioredoxin-like  30.89 
 
 
254 aa  103  2e-21  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.766101  n/a   
 
 
-
 
NC_008542  Bcen2424_1993  protein of unknown function DUF899, thioredoxin family protein  30.89 
 
 
254 aa  103  2e-21  Burkholderia cenocepacia HI2424  Bacteria  normal  0.255854  n/a   
 
 
-
 
NC_010508  Bcenmc03_2013  protein of unknown function DUF899 thioredoxin family protein  30.89 
 
 
254 aa  103  2e-21  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0767296  normal 
 
 
-
 
NC_009485  BBta_6459  hypothetical protein  35.83 
 
 
253 aa  102  4e-21  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.335869  normal  0.619063 
 
 
-
 
NC_009636  Smed_0353  protein of unknown function DUF899 thioredoxin family protein  42.25 
 
 
255 aa  103  4e-21  Sinorhizobium medicae WSM419  Bacteria  decreased coverage  0.00646248  normal  0.96044 
 
 
-
 
NC_007953  Bxe_C0023  hypothetical protein  41.13 
 
 
253 aa  101  9e-21  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.428755 
 
 
-
 
NC_011369  Rleg2_2342  protein of unknown function DUF899 thioredoxin family protein  42.25 
 
 
265 aa  95.9  6e-19  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.140568 
 
 
-
 
NC_010625  Bphy_6464  protein of unknown function DUF899 thioredoxin family protein  41.72 
 
 
256 aa  94.4  2e-18  Burkholderia phymatum STM815  Bacteria  normal  normal  0.586164 
 
 
-
 
NC_007974  Rmet_5691  Thioredoxin-(TRX) like protein  29.66 
 
 
257 aa  92.4  6e-18  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_2672  protein of unknown function DUF899 thioredoxin family protein  39.44 
 
 
265 aa  90.1  3e-17  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.087051  normal 
 
 
-
 
NC_012858  Rleg_6928  protein of unknown function DUF899 thioredoxin family protein  29.19 
 
 
233 aa  69.7  0.00000000005  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.135694  normal 
 
 
-
 
NC_009953  Sare_2183  protein of unknown function DUF899 thioredoxin family protein  28.57 
 
 
230 aa  68.9  0.00000000008  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.0511946 
 
 
-
 
NC_011366  Rleg2_5933  protein of unknown function DUF899 thioredoxin family protein  29.19 
 
 
233 aa  67.4  0.0000000002  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.10378  normal  0.102215 
 
 
-
 
NC_007348  Reut_B4359  hypothetical protein  28.29 
 
 
232 aa  65.9  0.0000000007  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_1614  hypothetical protein  28.44 
 
 
226 aa  62.8  0.000000005  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
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