| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_6078 |
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| Symbol | |
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| ID | 7975524 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012792 |
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| Strand | - |
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| Start bp | 798108 |
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| End bp | 798905 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644796634 |
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| Product | protein of unknown function DUF899 thioredoxin family protein |
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| Protein accession | YP_002947908 |
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| Protein GI | 239820723 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4312] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGACTT CCACCGAGAA CGGAAAGAAG GGCACCGCGC CCGCCATGCA CACCCCACCG
GTCGTTTCGC CCGAGGCGTG GGAAGCGGCC CGCGAGCAGC TGCTCGTGAA GGAAAAGGCC
CAGACCCGAG CGCGCGACGC GCTGGCCGCC GAGCGCCGGC GCATGCCGTG GATGGCCGTG
GAAAAAACCT ATGCCTTCGA AGGACCCGCG GGCAAGGTCG GCCTGCCCGA GCTGTTCGAC
GGCCGGCGCC AGCTGATCGT CTACCGCGCC TTCTTCGAGC CCGGCGTGTT CGGCTGGCCC
GACCACGCCT GCCGCGGCTG CTCCATGGTG GCCGACCAGG TCGCCCATGT CGCCCACCTG
AACGCCCGCG ACACCACCCT GGTCTTCGTC TCGCGCGCGC CGCAGGCGGA CATCGCGCGG
CTGAAGGCGC GCATGGGCTG GGAGATTCCG TGGTTCACGC TCACTGACAG CTTCGACGCC
GACTTCGGCG TGCACGAATG GCACGGCACC AACGTGTTCT ACCGCGACGC AGGCGGCCGC
GTGTTCCGCA CCTACTTCCT CAACAACCGC GGCGACGAGC AGATGGGCAA CACCTGGAAC
TACCTCGACA TCACGCCGCT CGGCCGGCAG GAAGTGTGGG AAGACTCGCC CGAGGGCTAC
CCGCAGACGC CCACCTACAA GTGGTGGAAC TGGCACGACA ACTACGCCGA GGAGGCCGTG
CCCGACAAGA AGTGGGTCGA GATCTCCACC GCCGGCGAGG CGGCGTTCCG CGAGCAGAGC
CAGAACGCGA AGCGCTGA
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| Protein sequence | MTTSTENGKK GTAPAMHTPP VVSPEAWEAA REQLLVKEKA QTRARDALAA ERRRMPWMAV
EKTYAFEGPA GKVGLPELFD GRRQLIVYRA FFEPGVFGWP DHACRGCSMV ADQVAHVAHL
NARDTTLVFV SRAPQADIAR LKARMGWEIP WFTLTDSFDA DFGVHEWHGT NVFYRDAGGR
VFRTYFLNNR GDEQMGNTWN YLDITPLGRQ EVWEDSPEGY PQTPTYKWWN WHDNYAEEAV
PDKKWVEIST AGEAAFREQS QNAKR
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