Gene Amir_4114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_4114 
Symbol 
ID8328307 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp4833383 
End bp4834081 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content67% 
IMG OID644944578 
Productprotein of unknown function DUF899 thioredoxin family protein 
Protein accessionYP_003101815 
Protein GI256378155 
COG category[S] Function unknown 
COG ID[COG4312] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAGTC CGCAGGTCGT CACCAGGGCG GAGTGGTTGC AGGCCCGCAA GGTCCTGCTG 
GAGAAGGAGA AGGAGGTCAC CAGGGCGCGT GACGAGATCG CCGCCCAGCG CCGCGAGTTG
CCGATGGTGC TGGTGGAGAA GGACTACCGG TTCCAAGGGC CGGACGGCGA GCTGGGCCTG
CTGGAGATGT TCGAGGGCCG CCGCCAGCTC GTGGTCCGCC ACTACATGTA CAGCCCCGGC
GCGCAGGAGG GCTGCATCGG CTGCTCCATG CAGGCCGACA GCGTCGGCGA GCTGGCCCAC
ATGTGGGCGC GCGACACCAC GTTCGCCATG GTCTCCCGCG CCCCGTACCC GGACTTCCAG
CCGTTCAAGG CGCGCATGGG CTGGACCATG CCCTGGTACT CCTCGTTCGG CAGCGACTTC
AACTACGACT ACGAGGTCTC CACCGAGCAG GGCGAGTCGC CGGGGGTGAG CGCCTTCTAC
CGCGAGGGCG ACCAGGTCTT CCACACCTAC TCGGTGTTCG ACCGGGGCGG GGAGATCTTC
AAGAACTTCT ACAACTACCT GGACATCACC CACCTCGGGC GCCGCGAGGA CGAGCTGGAG
CACCCGTGGG ACTGGTGGCG GTTCAAGGAC CGCTACGAGG CCGCCGAGGC GTCCGGGCCC
GGCGAGAACT GGTGGAACAA CACCAGGTTC AAGGGCTGA
 
Protein sequence
MSSPQVVTRA EWLQARKVLL EKEKEVTRAR DEIAAQRREL PMVLVEKDYR FQGPDGELGL 
LEMFEGRRQL VVRHYMYSPG AQEGCIGCSM QADSVGELAH MWARDTTFAM VSRAPYPDFQ
PFKARMGWTM PWYSSFGSDF NYDYEVSTEQ GESPGVSAFY REGDQVFHTY SVFDRGGEIF
KNFYNYLDIT HLGRREDELE HPWDWWRFKD RYEAAEASGP GENWWNNTRF KG