| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_2142 |
|---|
| Symbol | |
|---|
| ID | 8333487 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 2428423 |
|---|
| End bp | 2429142 |
|---|
| Gene Length | 720 bp |
|---|
| Protein Length | 239 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644955292 |
|---|
| Product | protein of unknown function DUF899 thioredoxin family protein |
|---|
| Protein accession | YP_003112902 |
|---|
| Protein GI | 256391338 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4312] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCAG ACCGACCCCC GCTCCCGGAG GTCACCGACC GCCAGACCTG GCAGGCCCAG
CTCGACGAGC TGGCCGTCCG CGAGAAGGCG CACACCCGCG AGGGCGACAG GCTCGCCGCG
GCCCGCCGCC GGCTGCCGAT GGTCGAGGTG GATCCGTCCA TCCCGGTCGT CGGCGCGCAG
GGCCCGGTCC CGCTGCTCGA CGTGTTCGAG GGCCGGCGCA TGCTGACCGT GTACTACGCC
ATGTGGCACG ACGACCGCGC CCCGAAGGAC CAGTGCGAAG GCTGCACCTT CTTCACCGCC
GAGGTCCAGG AGCTGGCGTA CCTGCACTCC CGCGACGTCA CCTATGCGGT CTTCTCGCAG
GGCCCGTACG AGCTCAGCCG CGCCTACTAC GACTTCCTCG GCTGGGACGT GCCCTGGTAC
TCGGCGCGCG ACTCCGCCGA ACAGCTGCTC GCCGACCGCT GGTTCGGTAT GCGCGTCAGC
TACCTGCGGG AGGGCGACCG CGTGTTCGAG ACCTACTGGA CCACCGGACG CGGGGTGGAG
CGTGCCGCGC CGAGCTACGC GATCCTGGAC GAGACGCTCT ACGGCCGCCA GGAGACCTGG
GAGGACTCGC CCGAGGGCTG GCCGAAGGAG TTCGGCGTCT CCGGTGAGCA GTTCCGGGTC
GAGGGTCGGC CGACGGCGCA GTGGGTCCAG CTCAGCGCCG GCAAGAAGGA ACCGTTCTAG
|
|---|
| Protein sequence | MTADRPPLPE VTDRQTWQAQ LDELAVREKA HTREGDRLAA ARRRLPMVEV DPSIPVVGAQ
GPVPLLDVFE GRRMLTVYYA MWHDDRAPKD QCEGCTFFTA EVQELAYLHS RDVTYAVFSQ
GPYELSRAYY DFLGWDVPWY SARDSAEQLL ADRWFGMRVS YLREGDRVFE TYWTTGRGVE
RAAPSYAILD ETLYGRQETW EDSPEGWPKE FGVSGEQFRV EGRPTAQWVQ LSAGKKEPF
|
|---|
| |