116 homologs were found in PanDaTox collection
for query gene Swit_4488 on replicon NC_009511
Organism: Sphingomonas wittichii RW1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009511  Swit_4488  protein of unknown function DUF899, thioredoxin family protein  100 
 
 
246 aa  507  1e-143  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.394996 
 
 
-
 
NC_011369  Rleg2_0816  protein of unknown function DUF899 thioredoxin family protein  70.2 
 
 
242 aa  367  1e-100  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  decreased coverage  0.00565144  normal  0.265134 
 
 
-
 
NC_012850  Rleg_0929  protein of unknown function DUF899 thioredoxin family protein  70.61 
 
 
242 aa  362  3e-99  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.312824  normal  0.683768 
 
 
-
 
NC_010682  Rpic_0955  protein of unknown function DUF899 thioredoxin family protein  67.48 
 
 
255 aa  353  2e-96  Ralstonia pickettii 12J  Bacteria  decreased coverage  0.000224117  normal  0.0204099 
 
 
-
 
NC_003295  RSc1113  hypothetical protein  65.98 
 
 
244 aa  346  2e-94  Ralstonia solanacearum GMI1000  Bacteria  hitchhiker  0.0000287552  normal  0.212062 
 
 
-
 
NC_009668  Oant_3485  protein of unknown function DUF899 thioredoxin family protein  68.05 
 
 
241 aa  345  3e-94  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.895959  n/a   
 
 
-
 
NC_012856  Rpic12D_1052  protein of unknown function DUF899 thioredoxin family protein  64.9 
 
 
244 aa  344  8.999999999999999e-94  Ralstonia pickettii 12D  Bacteria  decreased coverage  0.0000759433  normal  0.0411864 
 
 
-
 
NC_010338  Caul_2485  protein of unknown function DUF899 thioredoxin family protein  63.93 
 
 
245 aa  328  5.0000000000000004e-89  Caulobacter sp. K31  Bacteria  normal  0.267783  normal 
 
 
-
 
NC_008463  PA14_46820  hypothetical protein  58.78 
 
 
249 aa  295  4e-79  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0659228  decreased coverage  0.000000227534 
 
 
-
 
NC_008254  Meso_0994  protein of unknown function DUF899, thioredoxin-like  60 
 
 
230 aa  294  8e-79  Chelativorans sp. BNC1  Bacteria  normal  0.617473  n/a   
 
 
-
 
NC_010622  Bphy_1818  protein of unknown function DUF899 thioredoxin family protein  56.28 
 
 
258 aa  292  3e-78  Burkholderia phymatum STM815  Bacteria  normal  normal  0.229326 
 
 
-
 
NC_009668  Oant_4055  protein of unknown function DUF899 thioredoxin family protein  59.15 
 
 
236 aa  290  2e-77  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_4033  hypothetical protein  56.33 
 
 
249 aa  285  2.9999999999999996e-76  Pseudomonas aeruginosa PA7  Bacteria  normal  0.179526  n/a   
 
 
-
 
NC_002947  PP_2851  hypothetical protein  58.44 
 
 
242 aa  285  7e-76  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_1526  protein of unknown function DUF899 thioredoxin family protein  55.56 
 
 
245 aa  277  1e-73  Burkholderia phytofirmans PsJN  Bacteria  normal  0.899756  normal 
 
 
-
 
NC_010322  PputGB1_2930  protein of unknown function DUF899 thioredoxin family protein  60.33 
 
 
242 aa  276  2e-73  Pseudomonas putida GB-1  Bacteria  normal  0.0915809  normal 
 
 
-
 
NC_007948  Bpro_1368  protein of unknown function DUF899, thioredoxin-like  56.12 
 
 
273 aa  275  3e-73  Polaromonas sp. JS666  Bacteria  normal  normal  0.836068 
 
 
-
 
NC_010501  PputW619_2423  protein of unknown function DUF899 thioredoxin family protein  56.43 
 
 
240 aa  275  4e-73  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_1441  hypothetical protein  54.55 
 
 
244 aa  275  5e-73  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_0083  protein of unknown function DUF899, thioredoxin-like  52.76 
 
 
265 aa  272  3e-72  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_013037  Dfer_2074  protein of unknown function DUF899 thioredoxin family protein  55.06 
 
 
258 aa  269  4e-71  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_2838  protein of unknown function DUF899, thioredoxin family protein  58.02 
 
 
242 aa  268  8e-71  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_012792  Vapar_6317  protein of unknown function DUF899 thioredoxin family protein  53.53 
 
 
265 aa  265  5e-70  Variovorax paradoxus S110  Bacteria  normal  0.645433  n/a   
 
 
-
 
NC_007651  BTH_I2055  hypothetical protein  54.12 
 
 
254 aa  255  4e-67  Burkholderia thailandensis E264  Bacteria  normal  0.478815  n/a   
 
 
-
 
NC_008062  Bcen_6084  protein of unknown function DUF899, thioredoxin-like  53.54 
 
 
254 aa  253  2.0000000000000002e-66  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.766101  n/a   
 
 
-
 
NC_008542  Bcen2424_1993  protein of unknown function DUF899, thioredoxin family protein  53.54 
 
 
254 aa  253  2.0000000000000002e-66  Burkholderia cenocepacia HI2424  Bacteria  normal  0.255854  n/a   
 
 
-
 
NC_010508  Bcenmc03_2013  protein of unknown function DUF899 thioredoxin family protein  53.54 
 
 
254 aa  253  2.0000000000000002e-66  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0767296  normal 
 
 
-
 
NC_013132  Cpin_5073  protein of unknown function DUF899 thioredoxin family protein  49.4 
 
 
257 aa  251  5.000000000000001e-66  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.309281 
 
 
-
 
NC_010084  Bmul_1283  protein of unknown function DUF899 thioredoxin family protein  52.76 
 
 
254 aa  251  6e-66  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.0515883  normal  0.391418 
 
 
-
 
NC_007953  Bxe_C0023  hypothetical protein  52.55 
 
 
253 aa  251  9.000000000000001e-66  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.428755 
 
 
-
 
NC_009485  BBta_6459  hypothetical protein  52.76 
 
 
253 aa  251  1e-65  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.335869  normal  0.619063 
 
 
-
 
NC_010676  Bphyt_4116  protein of unknown function DUF899 thioredoxin family protein  50.79 
 
 
255 aa  251  1e-65  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007434  BURPS1710b_2551  hypothetical protein  54.12 
 
 
254 aa  250  2e-65  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B0544  hypothetical protein  51.38 
 
 
255 aa  248  4e-65  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.457717 
 
 
-
 
NC_008390  Bamb_2026  protein of unknown function DUF899, thioredoxin family protein  52.36 
 
 
254 aa  248  7e-65  Burkholderia ambifaria AMMD  Bacteria  normal  0.517928  n/a   
 
 
-
 
NC_009076  BURPS1106A_2459  hypothetical protein  53.73 
 
 
254 aa  248  7e-65  Burkholderia pseudomallei 1106a  Bacteria  normal  0.0588117  n/a   
 
 
-
 
NC_006348  BMA1526  hypothetical protein  53.73 
 
 
254 aa  247  1e-64  Burkholderia mallei ATCC 23344  Bacteria  normal  0.153792  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2026  hypothetical protein  53.73 
 
 
254 aa  247  1e-64  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A3286  hypothetical protein  53.73 
 
 
254 aa  247  1e-64  Burkholderia mallei NCTC 10229  Bacteria  normal  0.0189775  n/a   
 
 
-
 
NC_009074  BURPS668_2407  hypothetical protein  52.55 
 
 
254 aa  247  1e-64  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_1297  hypothetical protein  53.73 
 
 
254 aa  247  1e-64  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_010551  BamMC406_1895  protein of unknown function DUF899 thioredoxin family protein  52.76 
 
 
254 aa  246  3e-64  Burkholderia ambifaria MC40-6  Bacteria  normal  0.814935  normal 
 
 
-
 
NC_010682  Rpic_1313  protein of unknown function DUF899 thioredoxin family protein  52.19 
 
 
256 aa  245  4.9999999999999997e-64  Ralstonia pickettii 12J  Bacteria  normal  normal  0.603997 
 
 
-
 
NC_012856  Rpic12D_1377  protein of unknown function DUF899 thioredoxin family protein  51.79 
 
 
256 aa  243  9.999999999999999e-64  Ralstonia pickettii 12D  Bacteria  normal  0.349929  normal 
 
 
-
 
NC_007510  Bcep18194_A5303  protein of unknown function DUF899, thioredoxin-like  51.97 
 
 
254 aa  243  1.9999999999999999e-63  Burkholderia sp. 383  Bacteria  normal  0.789513  normal  0.132054 
 
 
-
 
NC_008009  Acid345_1332  protein of unknown function DUF899, thioredoxin-like  47.76 
 
 
272 aa  242  3e-63  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_008687  Pden_3150  protein of unknown function DUF899, thioredoxin family protein  52.32 
 
 
228 aa  242  3.9999999999999997e-63  Paracoccus denitrificans PD1222  Bacteria  normal  0.3957  normal 
 
 
-
 
NC_009636  Smed_0353  protein of unknown function DUF899 thioredoxin family protein  50 
 
 
255 aa  241  7e-63  Sinorhizobium medicae WSM419  Bacteria  decreased coverage  0.00646248  normal  0.96044 
 
 
-
 
NC_009719  Plav_1073  protein of unknown function DUF899 thioredoxin family protein  51.23 
 
 
241 aa  238  5e-62  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_010625  Bphy_6464  protein of unknown function DUF899 thioredoxin family protein  50.59 
 
 
256 aa  236  3e-61  Burkholderia phymatum STM815  Bacteria  normal  normal  0.586164 
 
 
-
 
NC_009511  Swit_4847  protein of unknown function DUF899, thioredoxin family protein  53.59 
 
 
232 aa  232  3e-60  Sphingomonas wittichii RW1  Bacteria  normal  0.890001  normal 
 
 
-
 
NC_013739  Cwoe_0616  protein of unknown function DUF899 thioredoxin family protein  51.29 
 
 
244 aa  216  2.9999999999999998e-55  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_2672  protein of unknown function DUF899 thioredoxin family protein  48.3 
 
 
265 aa  215  5.9999999999999996e-55  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.087051  normal 
 
 
-
 
NC_009439  Pmen_1335  protein of unknown function DUF899, thioredoxin family protein  48.24 
 
 
260 aa  212  3.9999999999999995e-54  Pseudomonas mendocina ymp  Bacteria  normal  0.146435  normal 
 
 
-
 
NC_011369  Rleg2_2342  protein of unknown function DUF899 thioredoxin family protein  46.42 
 
 
265 aa  211  9e-54  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.140568 
 
 
-
 
NC_007974  Rmet_5691  Thioredoxin-(TRX) like protein  50.19 
 
 
257 aa  211  1e-53  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_0313  protein of unknown function DUF899, thioredoxin family protein  47.66 
 
 
234 aa  196  3e-49  Streptosporangium roseum DSM 43021  Bacteria  normal  0.316291  normal 
 
 
-
 
NC_013739  Cwoe_4051  protein of unknown function DUF899 thioredoxin family protein  47.95 
 
 
238 aa  183  2.0000000000000003e-45  Conexibacter woesei DSM 14684  Bacteria  normal  0.541879  normal 
 
 
-
 
NC_009719  Plav_0967  protein of unknown function DUF899 thioredoxin family protein  45.29 
 
 
266 aa  183  3e-45  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_4093  protein of unknown function DUF899 thioredoxin family protein  46.43 
 
 
257 aa  181  9.000000000000001e-45  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_3906  protein of unknown function DUF899, thioredoxin-like protein  43.15 
 
 
223 aa  177  2e-43  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_3980  protein of unknown function DUF899, thioredoxin family protein  43.15 
 
 
223 aa  177  2e-43  Mycobacterium sp. KMS  Bacteria  normal  0.590341  normal 
 
 
-
 
NC_009077  Mjls_3921  protein of unknown function DUF899, thioredoxin family protein  43.15 
 
 
223 aa  177  2e-43  Mycobacterium sp. JLS  Bacteria  normal  0.0512344  normal  0.178262 
 
 
-
 
NC_010571  Oter_1120  protein of unknown function DUF899 thioredoxin family protein  46.26 
 
 
255 aa  176  3e-43  Opitutus terrae PB90-1  Bacteria  normal  0.845811  normal 
 
 
-
 
NC_009338  Mflv_2284  protein of unknown function DUF899, thioredoxin family protein  44.24 
 
 
224 aa  169  5e-41  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.41995 
 
 
-
 
NC_013093  Amir_4114  protein of unknown function DUF899 thioredoxin family protein  43.95 
 
 
232 aa  167  1e-40  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_4382  protein of unknown function DUF899, thioredoxin family protein  39.42 
 
 
224 aa  166  2.9999999999999998e-40  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_2736  protein of unknown function DUF899, thioredoxin family protein  41.32 
 
 
222 aa  160  2e-38  Salinispora tropica CNB-440  Bacteria  normal  0.0311425  normal  0.559549 
 
 
-
 
NC_013739  Cwoe_0865  protein of unknown function DUF899 thioredoxin family protein  38.33 
 
 
223 aa  135  7.000000000000001e-31  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_012792  Vapar_6078  protein of unknown function DUF899 thioredoxin family protein  38.46 
 
 
265 aa  132  5e-30  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_1142  protein of unknown function DUF899, thioredoxin-like protein  33.98 
 
 
231 aa  132  6.999999999999999e-30  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_1159  protein of unknown function DUF899, thioredoxin family protein  33.98 
 
 
231 aa  132  6.999999999999999e-30  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_1169  protein of unknown function DUF899, thioredoxin family protein  33.85 
 
 
231 aa  131  7.999999999999999e-30  Mycobacterium sp. JLS  Bacteria  normal  0.768824  normal  0.199001 
 
 
-
 
NC_010625  Bphy_7225  protein of unknown function DUF899 thioredoxin family protein  38.01 
 
 
261 aa  129  6e-29  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_0692  protein of unknown function DUF899, thioredoxin family protein  33.2 
 
 
241 aa  126  3e-28  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.0179397 
 
 
-
 
NC_012850  Rleg_2487  protein of unknown function DUF899 thioredoxin family protein  35.84 
 
 
262 aa  122  4e-27  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_2194  protein of unknown function DUF899 thioredoxin family protein  35.14 
 
 
261 aa  119  4.9999999999999996e-26  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.167209  normal  0.0853422 
 
 
-
 
NC_009636  Smed_1280  protein of unknown function DUF899 thioredoxin family protein  34.84 
 
 
253 aa  118  7.999999999999999e-26  Sinorhizobium medicae WSM419  Bacteria  normal  0.127918  normal  0.405689 
 
 
-
 
NC_008009  Acid345_1333  protein of unknown function DUF899, thioredoxin-like  34.68 
 
 
266 aa  111  1.0000000000000001e-23  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.726839  normal 
 
 
-
 
NC_014158  Tpau_3564  protein of unknown function DUF899 thioredoxin family protein  33.76 
 
 
229 aa  104  1e-21  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.236943  n/a   
 
 
-
 
NC_013172  Bfae_00900  hypothetical protein  33.03 
 
 
232 aa  102  6e-21  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0282  protein of unknown function DUF899 thioredoxin family protein  31.84 
 
 
233 aa  96.7  3e-19  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.0258482 
 
 
-
 
NC_008726  Mvan_2972  protein of unknown function DUF899, thioredoxin family protein  32.27 
 
 
228 aa  91.3  1e-17  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.169644  normal  0.281677 
 
 
-
 
NC_009077  Mjls_0326  protein of unknown function DUF899, thioredoxin family protein  31.67 
 
 
229 aa  91.7  1e-17  Mycobacterium sp. JLS  Bacteria  normal  normal  0.497022 
 
 
-
 
NC_008146  Mmcs_0337  protein of unknown function DUF899, thioredoxin-like protein  31.67 
 
 
229 aa  90.9  2e-17  Mycobacterium sp. MCS  Bacteria  normal  0.0510576  n/a   
 
 
-
 
NC_008705  Mkms_0347  protein of unknown function DUF899, thioredoxin family protein  31.67 
 
 
229 aa  90.9  2e-17  Mycobacterium sp. KMS  Bacteria  normal  normal  0.33372 
 
 
-
 
NC_009953  Sare_2183  protein of unknown function DUF899 thioredoxin family protein  31.25 
 
 
230 aa  84.7  0.000000000000001  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.0511946 
 
 
-
 
NC_013172  Bfae_22490  hypothetical protein  30.96 
 
 
256 aa  84.3  0.000000000000002  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_3255  protein of unknown function DUF899, thioredoxin family protein  30.7 
 
 
231 aa  84  0.000000000000002  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_012858  Rleg_6928  protein of unknown function DUF899 thioredoxin family protein  29.26 
 
 
233 aa  84  0.000000000000002  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.135694  normal 
 
 
-
 
NC_007777  Francci3_1617  protein of unknown function DUF899, thioredoxin-like  30.59 
 
 
260 aa  83.6  0.000000000000003  Frankia sp. CcI3  Bacteria  normal  0.780287  normal  0.292856 
 
 
-
 
NC_013757  Gobs_2314  protein of unknown function DUF899 thioredoxin family protein  29.68 
 
 
260 aa  82.8  0.000000000000004  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_4042  protein of unknown function DUF899 thioredoxin family protein  30.59 
 
 
260 aa  83.2  0.000000000000004  Frankia sp. EAN1pec  Bacteria  normal  normal  0.0967044 
 
 
-
 
NC_013947  Snas_6291  hypothetical protein  30.63 
 
 
260 aa  81.6  0.00000000000001  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_011366  Rleg2_5933  protein of unknown function DUF899 thioredoxin family protein  29.69 
 
 
233 aa  81.6  0.00000000000001  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.10378  normal  0.102215 
 
 
-
 
NC_007778  RPB_3245  hypothetical protein  29.39 
 
 
231 aa  80.1  0.00000000000003  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B0953  hypothetical protein  29.77 
 
 
242 aa  80.1  0.00000000000003  Burkholderia xenovorans LB400  Bacteria  normal  0.920256  normal 
 
 
-
 
NC_009972  Haur_4695  protein of unknown function DUF899 thioredoxin family protein  28.18 
 
 
265 aa  79.7  0.00000000000004  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A2205  hypothetical protein  30.53 
 
 
236 aa  77  0.0000000000002  Burkholderia pseudomallei 1710b  Bacteria  unclonable  0.000000000209346  n/a   
 
 
-
 
NC_008835  BMA10229_0045  hypothetical protein  30.53 
 
 
236 aa  77.4  0.0000000000002  Burkholderia mallei NCTC 10229  Bacteria  hitchhiker  0.0000000000431681  n/a   
 
 
-
 
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