Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1113 |
Symbol | |
ID | 1219926 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 1169334 |
End bp | 1170068 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637237480 |
Product | hypothetical protein |
Protein accession | NP_519234 |
Protein GI | 17545832 |
COG category | [S] Function unknown |
COG ID | [COG4312] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000287552 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.212062 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCAGC ACCCTGTTGT TTCGAGAGAG GAATGGCTGG TCAAGCGCCG CGCGCTGTTG GCCAGAGAGA AGGAGGCGAT TCATCAGCGC GATGCCATTA CCGCCGAGCG GCTGGCGCTG CCGTGGGTCA AGGTCGACAC ACGCTATGTG TTCGATACCG CGTCAGGCAA GAAGACGCTG GCCGACCTGT TCGACGGCCG CAGCCAGCTG ATGATCTACC ACTTCATGCT CGGTCCGGGC TGGGCGGCCG GCTGCCCGGG CTGCTCGCTG GTGGCGGACC ACCTGGGCGG AACGCTCGCG CACCTGAATC ATCACGACGT CACGTTGATC GCCGTGTCGC GCGCGCCGCT GCCCGAGATC GAGGCCTACC GGCAGCGTAT GGGCTGGCAG TTTCCGTGGG CCTCGTCGTT CGGCACGACC TTCAACCATG ATTTCCGTGT CAGCTTCACC CCGGACGAAC TGGCCAGCGG CGCCGTCGAC TACAACTACA CGTCCACCCA ATCGGCGCAA GCCAACGACG AACTGCCCGG CCTGAGCGCC TTCTACAAGG ACGAGGCGGG CAACGTGTAT CACACGTACT CGACCTACGC GCGCGGGCTC GAAGACCTGA TCGGCACCTT CCTGATCCTC GATCGGGCGC CGAAGGGGCG CAATGAGTCC GGCCCCATGG AATGGGTGCG CCGTCACGAT GAATACGGGG ATGCCCCGAA GGCGAACGCC TGCTATGAGG GCTGA
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Protein sequence | MQQHPVVSRE EWLVKRRALL AREKEAIHQR DAITAERLAL PWVKVDTRYV FDTASGKKTL ADLFDGRSQL MIYHFMLGPG WAAGCPGCSL VADHLGGTLA HLNHHDVTLI AVSRAPLPEI EAYRQRMGWQ FPWASSFGTT FNHDFRVSFT PDELASGAVD YNYTSTQSAQ ANDELPGLSA FYKDEAGNVY HTYSTYARGL EDLIGTFLIL DRAPKGRNES GPMEWVRRHD EYGDAPKANA CYEG
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