Gene RSc1113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc1113 
Symbol 
ID1219926 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp1169334 
End bp1170068 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content65% 
IMG OID637237480 
Producthypothetical protein 
Protein accessionNP_519234 
Protein GI17545832 
COG category[S] Function unknown 
COG ID[COG4312] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000287552 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.212062 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCAGC ACCCTGTTGT TTCGAGAGAG GAATGGCTGG TCAAGCGCCG CGCGCTGTTG 
GCCAGAGAGA AGGAGGCGAT TCATCAGCGC GATGCCATTA CCGCCGAGCG GCTGGCGCTG
CCGTGGGTCA AGGTCGACAC ACGCTATGTG TTCGATACCG CGTCAGGCAA GAAGACGCTG
GCCGACCTGT TCGACGGCCG CAGCCAGCTG ATGATCTACC ACTTCATGCT CGGTCCGGGC
TGGGCGGCCG GCTGCCCGGG CTGCTCGCTG GTGGCGGACC ACCTGGGCGG AACGCTCGCG
CACCTGAATC ATCACGACGT CACGTTGATC GCCGTGTCGC GCGCGCCGCT GCCCGAGATC
GAGGCCTACC GGCAGCGTAT GGGCTGGCAG TTTCCGTGGG CCTCGTCGTT CGGCACGACC
TTCAACCATG ATTTCCGTGT CAGCTTCACC CCGGACGAAC TGGCCAGCGG CGCCGTCGAC
TACAACTACA CGTCCACCCA ATCGGCGCAA GCCAACGACG AACTGCCCGG CCTGAGCGCC
TTCTACAAGG ACGAGGCGGG CAACGTGTAT CACACGTACT CGACCTACGC GCGCGGGCTC
GAAGACCTGA TCGGCACCTT CCTGATCCTC GATCGGGCGC CGAAGGGGCG CAATGAGTCC
GGCCCCATGG AATGGGTGCG CCGTCACGAT GAATACGGGG ATGCCCCGAA GGCGAACGCC
TGCTATGAGG GCTGA
 
Protein sequence
MQQHPVVSRE EWLVKRRALL AREKEAIHQR DAITAERLAL PWVKVDTRYV FDTASGKKTL 
ADLFDGRSQL MIYHFMLGPG WAAGCPGCSL VADHLGGTLA HLNHHDVTLI AVSRAPLPEI
EAYRQRMGWQ FPWASSFGTT FNHDFRVSFT PDELASGAVD YNYTSTQSAQ ANDELPGLSA
FYKDEAGNVY HTYSTYARGL EDLIGTFLIL DRAPKGRNES GPMEWVRRHD EYGDAPKANA
CYEG