Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_4042 |
Symbol | |
ID | 5672400 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 4820443 |
End bp | 4821225 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641242918 |
Product | protein of unknown function DUF899 thioredoxin family protein |
Protein accession | YP_001508335 |
Protein GI | 158315827 |
COG category | [S] Function unknown |
COG ID | [COG4312] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0967044 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGACCA CGCCGGACGA CCCGACCACC GCGCTGCCCG GCCGCCCGCC CGTCGTTGAC CTAGCCACCT GGCAGACCGC CCGTGACGAG CTCCTGGTCC GCGAGAAGGC CCACACCCGT GAGGGCGACG CCCTCGCCGC GGCCCGCCGC CGGCTGCCGA TGGTGGAGCT CGACGGGACG GTCGAGGTCG TCGGACCCGA CGGCCCGGTC CCGTTCCTGG ACCTGTTCCA GGGCCGCGAC GAGCTCATGG TCTACAAGCA CATGTGGTAC GACGGCGCGC CGCACCAGGG GCAGTGCGAG GGCTGCACCA CCACGGCCTG GCACCTGAAG GACGCTGTCT ACCTCAACGC CCGCGGCGTC TCGTTCGCCA TCCTGACCAC GGGCCGGTGG GACGAGGTGG CCTCCTACGT CGAGTTCATG GGCTACACCC AGCCCTGGTA CTCGGTGCGC GACGTGGACG CGCCGGTCGG CGGCAGCATG GGTTACCTCA CCTGCTTCCT GCGCGACGGC GACCGCGTGT TCCTCACCTA CTCCACGACG GGCCGTGGCA ACGAGCCGGT CAACGGGTCC CTCGGCCTGC TCGACATGAC ACCCTACGGC CGCGGCGAGG CGTGGGAGGA CAACCCCGAG GGCTGGCCCG AGGGGCGCAG CTCGTGCTGG TTCTGGCGCT CGGACGCGGA CGGGAACGCC ACCTGGGGCC CGACCAGCCG CCCCGTGCCG CAGTGGACCC GCCACGGCGC GACCCCCGTG GAGTCCCTCG GCCGGCACGG CCACCGCCGC TGA
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Protein sequence | MTTTPDDPTT ALPGRPPVVD LATWQTARDE LLVREKAHTR EGDALAAARR RLPMVELDGT VEVVGPDGPV PFLDLFQGRD ELMVYKHMWY DGAPHQGQCE GCTTTAWHLK DAVYLNARGV SFAILTTGRW DEVASYVEFM GYTQPWYSVR DVDAPVGGSM GYLTCFLRDG DRVFLTYSTT GRGNEPVNGS LGLLDMTPYG RGEAWEDNPE GWPEGRSSCW FWRSDADGNA TWGPTSRPVP QWTRHGATPV ESLGRHGHRR
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