| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4488 |
|---|
| Symbol | |
|---|
| ID | 5199999 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | - |
|---|
| Start bp | 4932138 |
|---|
| End bp | 4932878 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640584041 |
|---|
| Product | protein of unknown function DUF899, thioredoxin family protein |
|---|
| Protein accession | YP_001264964 |
|---|
| Protein GI | 148557382 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4312] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.394996 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCGATC ATGCCGTCGT ATCGCGCGAG GAATGGCTGC GCGCCCGCCG CGTCCTGCTG
GCCAAGGAGC GGGAGGCGAC CCATCTGCGC GACGCGGTGA ACGCGGCGCG GCTGGCCCTG
CCCTGGGTCC GGGTCGACGA GAGCTACAGC TTCGACACGC CGGACGGCGA GCGCAGCCTG
GCCGAGTTGT TCGACGGCCG GTCGCAACTC GTCGTCTATC ATTTCATGCT GGGCCCCGAC
TGGACGGCAG GCTGCCCCGG CTGTTCATTC CTGGCCGATC ATTTCGATGG GGCCCTGCCC
CACCTCAATC ATCACGACGT GACGCTGGTC GCGGTGTCGC GCGGGCCGCT GGCAGCGATC
GAGGCCTATC GGCGGCGGAT GGGGTGGCGC TTCCCCTGGG TGTCGTCGGC GGGCAGCGAC
TTCAACTTCG ACTATGGGGT ATCCTTCCCG GACGAGCAGC TCGCGAGCGG GCAGGTCGAC
TATAATTACG AGGCGATGGA GGTCGGCGAG CGCGGCGGCG ACCATGAGGA ATCACCGGGG
CTCAGCGCCT TCTTCAAGGA CGCGGACGGC ACCGTCTACC ATAGCTATTC GAGCTATGCC
CGCGGCTTCG AGGAGTTGAT CGGAACGCTG ATGATCCTCG ACCGCGCTCC CAAGGGGCGC
AACGAGGACG GCACGATGAG CTTCGTGCGG CGCCACGACG AATATGAGGA CGTGCCCAAG
GCAACTTGCT GCGCCCATTG A
|
|---|
| Protein sequence | MVDHAVVSRE EWLRARRVLL AKEREATHLR DAVNAARLAL PWVRVDESYS FDTPDGERSL
AELFDGRSQL VVYHFMLGPD WTAGCPGCSF LADHFDGALP HLNHHDVTLV AVSRGPLAAI
EAYRRRMGWR FPWVSSAGSD FNFDYGVSFP DEQLASGQVD YNYEAMEVGE RGGDHEESPG
LSAFFKDADG TVYHSYSSYA RGFEELIGTL MILDRAPKGR NEDGTMSFVR RHDEYEDVPK
ATCCAH
|
|---|
| |