Gene RPB_3245 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_3245 
Symbol 
ID3911046 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp3708093 
End bp3708788 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content70% 
IMG OID637885147 
Producthypothetical protein 
Protein accessionYP_486852 
Protein GI86750356 
COG category[S] Function unknown 
COG ID[COG4312] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTGA GGCCTGCTGC AGAACTCGCG CGTGAGGGTG AAGCCCGCTA TCCCAACGAA 
AGCGCCGACT ATCGCCGCGC CCGCGTGGCG CTGCTCGCCG AGGAAATCGA ACTGCGCCGG
CACATCGAGC GGGTCGCCGA GCAGCGCCGG CAATTGCCGC CGGGCGGGGA GGTGACCGGC
CAATATGCCT TCGAGGGGGC GGGCGGGCGG ACCGACTTCG CCGGGCTGTT TGGCGACAAG
CCGACACTGG TTGTCTACAG CTACATGTTC GGCCCGCAGC GCGCCGAGCC GTGTCCGATG
TGCACCTCGC TGCTCAGCGC CTGGGACGGC GAAGTCCCCG ACATCACCCA GCGGGTGGCG
CTGGCGATCG TCGCCCGGTC GCCGATCGAG CGGCTGGTCG CCTTCAAACG CGCGCGCGGC
TGGCAGCACC TGCCGCTGTT CACCGATCTC TCCGGCGACT ACAGCCGCGA CTATCACGGC
CTGACGCCGG ACGGCGGCGA CGACGCGGCG TTCAACGTGT TCAGCCGTCG CGACGGCACT
ATTCGGCACT TCTGGGGCGG CGAGATGTTC GCCACCAGCG CCGACCCCGG CCAGGACCCG
CGCGGCGCGC CGGATCTGAT GCCTCTATGG ACCATTCTCG ACGCCACGCC GGAGGGCCGG
GGGACCGACT GGTATCCGAA GCTCAGCTAC GGCTGA
 
Protein sequence
MSLRPAAELA REGEARYPNE SADYRRARVA LLAEEIELRR HIERVAEQRR QLPPGGEVTG 
QYAFEGAGGR TDFAGLFGDK PTLVVYSYMF GPQRAEPCPM CTSLLSAWDG EVPDITQRVA
LAIVARSPIE RLVAFKRARG WQHLPLFTDL SGDYSRDYHG LTPDGGDDAA FNVFSRRDGT
IRHFWGGEMF ATSADPGQDP RGAPDLMPLW TILDATPEGR GTDWYPKLSY G