108 homologs were found in PanDaTox collection
for query gene RPB_3245 on replicon NC_007778
Organism: Rhodopseudomonas palustris HaA2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007778  RPB_3245  hypothetical protein  100 
 
 
231 aa  469  1.0000000000000001e-131  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_2218  protein of unknown function DUF899, thioredoxin-like  87.01 
 
 
231 aa  412  1e-114  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.797158  normal  0.442221 
 
 
-
 
NC_011366  Rleg2_5933  protein of unknown function DUF899 thioredoxin family protein  74.56 
 
 
233 aa  356  1.9999999999999998e-97  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.10378  normal  0.102215 
 
 
-
 
NC_012858  Rleg_6928  protein of unknown function DUF899 thioredoxin family protein  73.68 
 
 
233 aa  356  1.9999999999999998e-97  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.135694  normal 
 
 
-
 
NC_010623  Bphy_5454  protein of unknown function DUF899 thioredoxin family protein  72.17 
 
 
236 aa  345  4e-94  Burkholderia phymatum STM815  Bacteria  normal  normal  0.0299136 
 
 
-
 
NC_007650  BTH_II1767  hypothetical protein  73.78 
 
 
236 aa  335  2.9999999999999997e-91  Burkholderia thailandensis E264  Bacteria  hitchhiker  0.000442261  n/a   
 
 
-
 
NC_007435  BURPS1710b_A2205  hypothetical protein  73.01 
 
 
236 aa  334  5e-91  Burkholderia pseudomallei 1710b  Bacteria  unclonable  0.000000000209346  n/a   
 
 
-
 
NC_006349  BMAA0828  hypothetical protein  73.01 
 
 
236 aa  333  1e-90  Burkholderia mallei ATCC 23344  Bacteria  hitchhiker  0.0000230425  n/a   
 
 
-
 
NC_008835  BMA10229_0045  hypothetical protein  73.01 
 
 
236 aa  333  1e-90  Burkholderia mallei NCTC 10229  Bacteria  hitchhiker  0.0000000000431681  n/a   
 
 
-
 
NC_009075  BURPS668_A0952  hypothetical protein  73.01 
 
 
236 aa  333  1e-90  Burkholderia pseudomallei 668  Bacteria  hitchhiker  0.00000000155269  n/a   
 
 
-
 
NC_009079  BMA10247_A1575  hypothetical protein  73.01 
 
 
236 aa  333  1e-90  Burkholderia mallei NCTC 10247  Bacteria  hitchhiker  0.0000230171  n/a   
 
 
-
 
NC_009078  BURPS1106A_A0859  hypothetical protein  72.57 
 
 
236 aa  331  6e-90  Burkholderia pseudomallei 1106a  Bacteria  normal  0.0194115  n/a   
 
 
-
 
NC_007348  Reut_B4359  hypothetical protein  67.11 
 
 
232 aa  325  3e-88  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010676  Bphyt_4678  protein of unknown function DUF899 thioredoxin family protein  64.78 
 
 
243 aa  311  4.999999999999999e-84  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B0953  hypothetical protein  62.45 
 
 
242 aa  292  3e-78  Burkholderia xenovorans LB400  Bacteria  normal  0.920256  normal 
 
 
-
 
NC_009636  Smed_1983  protein of unknown function DUF899 thioredoxin family protein  64.19 
 
 
235 aa  290  2e-77  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_007964  Nham_2749  protein of unknown function DUF899, thioredoxin-like  47.66 
 
 
239 aa  210  2e-53  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_1614  hypothetical protein  38.57 
 
 
226 aa  120  1.9999999999999998e-26  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_2183  protein of unknown function DUF899 thioredoxin family protein  34.45 
 
 
230 aa  115  3.9999999999999997e-25  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.0511946 
 
 
-
 
NC_007948  Bpro_1368  protein of unknown function DUF899, thioredoxin-like  31.84 
 
 
273 aa  92.8  4e-18  Polaromonas sp. JS666  Bacteria  normal  normal  0.836068 
 
 
-
 
NC_008463  PA14_46820  hypothetical protein  32.87 
 
 
249 aa  92.8  4e-18  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0659228  decreased coverage  0.000000227534 
 
 
-
 
NC_009656  PSPA7_4033  hypothetical protein  33.18 
 
 
249 aa  89.4  4e-17  Pseudomonas aeruginosa PA7  Bacteria  normal  0.179526  n/a   
 
 
-
 
NC_012850  Rleg_0929  protein of unknown function DUF899 thioredoxin family protein  31.16 
 
 
242 aa  88.2  1e-16  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.312824  normal  0.683768 
 
 
-
 
NC_009668  Oant_3485  protein of unknown function DUF899 thioredoxin family protein  30.95 
 
 
241 aa  85.5  6e-16  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.895959  n/a   
 
 
-
 
NC_007952  Bxe_B0544  hypothetical protein  30.86 
 
 
255 aa  85.1  9e-16  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.457717 
 
 
-
 
NC_008146  Mmcs_3906  protein of unknown function DUF899, thioredoxin-like protein  29.41 
 
 
223 aa  84.7  0.000000000000001  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_3980  protein of unknown function DUF899, thioredoxin family protein  29.41 
 
 
223 aa  84.7  0.000000000000001  Mycobacterium sp. KMS  Bacteria  normal  0.590341  normal 
 
 
-
 
NC_007510  Bcep18194_A5303  protein of unknown function DUF899, thioredoxin-like  30.99 
 
 
254 aa  84  0.000000000000002  Burkholderia sp. 383  Bacteria  normal  0.789513  normal  0.132054 
 
 
-
 
NC_009380  Strop_2736  protein of unknown function DUF899, thioredoxin family protein  28.92 
 
 
222 aa  83.6  0.000000000000002  Salinispora tropica CNB-440  Bacteria  normal  0.0311425  normal  0.559549 
 
 
-
 
NC_009439  Pmen_1335  protein of unknown function DUF899, thioredoxin family protein  30.37 
 
 
260 aa  84.3  0.000000000000002  Pseudomonas mendocina ymp  Bacteria  normal  0.146435  normal 
 
 
-
 
NC_007948  Bpro_0083  protein of unknown function DUF899, thioredoxin-like  29.44 
 
 
265 aa  83.6  0.000000000000003  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_0816  protein of unknown function DUF899 thioredoxin family protein  28.9 
 
 
242 aa  83.2  0.000000000000003  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  decreased coverage  0.00565144  normal  0.265134 
 
 
-
 
NC_009077  Mjls_3921  protein of unknown function DUF899, thioredoxin family protein  29.41 
 
 
223 aa  82.8  0.000000000000004  Mycobacterium sp. JLS  Bacteria  normal  0.0512344  normal  0.178262 
 
 
-
 
NC_008726  Mvan_4382  protein of unknown function DUF899, thioredoxin family protein  29.9 
 
 
224 aa  82.4  0.000000000000005  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_0353  protein of unknown function DUF899 thioredoxin family protein  34.59 
 
 
255 aa  81.6  0.000000000000009  Sinorhizobium medicae WSM419  Bacteria  decreased coverage  0.00646248  normal  0.96044 
 
 
-
 
NC_009338  Mflv_2284  protein of unknown function DUF899, thioredoxin family protein  30.39 
 
 
224 aa  81.3  0.00000000000001  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.41995 
 
 
-
 
NC_010681  Bphyt_1526  protein of unknown function DUF899 thioredoxin family protein  31.1 
 
 
245 aa  81.6  0.00000000000001  Burkholderia phytofirmans PsJN  Bacteria  normal  0.899756  normal 
 
 
-
 
NC_010682  Rpic_1313  protein of unknown function DUF899 thioredoxin family protein  33.08 
 
 
256 aa  81.3  0.00000000000001  Ralstonia pickettii 12J  Bacteria  normal  normal  0.603997 
 
 
-
 
NC_006348  BMA1526  hypothetical protein  32.91 
 
 
254 aa  80.5  0.00000000000002  Burkholderia mallei ATCC 23344  Bacteria  normal  0.153792  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2026  hypothetical protein  32.91 
 
 
254 aa  80.5  0.00000000000002  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A3286  hypothetical protein  32.91 
 
 
254 aa  80.5  0.00000000000002  Burkholderia mallei NCTC 10229  Bacteria  normal  0.0189775  n/a   
 
 
-
 
NC_009080  BMA10247_1297  hypothetical protein  32.91 
 
 
254 aa  80.5  0.00000000000002  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_009511  Swit_4488  protein of unknown function DUF899, thioredoxin family protein  29.39 
 
 
246 aa  80.1  0.00000000000002  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.394996 
 
 
-
 
NC_010084  Bmul_1283  protein of unknown function DUF899 thioredoxin family protein  30.99 
 
 
254 aa  80.5  0.00000000000002  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.0515883  normal  0.391418 
 
 
-
 
NC_010676  Bphyt_4116  protein of unknown function DUF899 thioredoxin family protein  30.46 
 
 
255 aa  80.5  0.00000000000002  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_1377  protein of unknown function DUF899 thioredoxin family protein  32.33 
 
 
256 aa  79  0.00000000000006  Ralstonia pickettii 12D  Bacteria  normal  0.349929  normal 
 
 
-
 
NC_008390  Bamb_2026  protein of unknown function DUF899, thioredoxin family protein  30.11 
 
 
254 aa  78.6  0.00000000000007  Burkholderia ambifaria AMMD  Bacteria  normal  0.517928  n/a   
 
 
-
 
NC_010338  Caul_2485  protein of unknown function DUF899 thioredoxin family protein  30.41 
 
 
245 aa  78.6  0.00000000000008  Caulobacter sp. K31  Bacteria  normal  0.267783  normal 
 
 
-
 
NC_013037  Dfer_2074  protein of unknown function DUF899 thioredoxin family protein  30.85 
 
 
258 aa  78.6  0.00000000000009  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_007953  Bxe_C0023  hypothetical protein  31.79 
 
 
253 aa  77.8  0.0000000000001  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.428755 
 
 
-
 
NC_009668  Oant_4055  protein of unknown function DUF899 thioredoxin family protein  29.09 
 
 
236 aa  77.8  0.0000000000001  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_2551  hypothetical protein  32.28 
 
 
254 aa  77.4  0.0000000000002  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_1332  protein of unknown function DUF899, thioredoxin-like  32.61 
 
 
272 aa  77  0.0000000000002  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_1441  hypothetical protein  30.41 
 
 
244 aa  76.6  0.0000000000003  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_010551  BamMC406_1895  protein of unknown function DUF899 thioredoxin family protein  30.11 
 
 
254 aa  76.3  0.0000000000003  Burkholderia ambifaria MC40-6  Bacteria  normal  0.814935  normal 
 
 
-
 
NC_009076  BURPS1106A_2459  hypothetical protein  32.28 
 
 
254 aa  76.3  0.0000000000004  Burkholderia pseudomallei 1106a  Bacteria  normal  0.0588117  n/a   
 
 
-
 
NC_007651  BTH_I2055  hypothetical protein  29.14 
 
 
254 aa  75.9  0.0000000000005  Burkholderia thailandensis E264  Bacteria  normal  0.478815  n/a   
 
 
-
 
NC_008062  Bcen_6084  protein of unknown function DUF899, thioredoxin-like  29.41 
 
 
254 aa  75.9  0.0000000000005  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.766101  n/a   
 
 
-
 
NC_008542  Bcen2424_1993  protein of unknown function DUF899, thioredoxin family protein  29.41 
 
 
254 aa  75.9  0.0000000000005  Burkholderia cenocepacia HI2424  Bacteria  normal  0.255854  n/a   
 
 
-
 
NC_010508  Bcenmc03_2013  protein of unknown function DUF899 thioredoxin family protein  29.41 
 
 
254 aa  75.9  0.0000000000005  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0767296  normal 
 
 
-
 
NC_009485  BBta_6459  hypothetical protein  33.33 
 
 
253 aa  75.5  0.0000000000007  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.335869  normal  0.619063 
 
 
-
 
NC_002947  PP_2851  hypothetical protein  27.16 
 
 
242 aa  74.7  0.000000000001  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_2342  protein of unknown function DUF899 thioredoxin family protein  33.33 
 
 
265 aa  74.7  0.000000000001  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.140568 
 
 
-
 
NC_012792  Vapar_6317  protein of unknown function DUF899 thioredoxin family protein  28.92 
 
 
265 aa  74.3  0.000000000001  Variovorax paradoxus S110  Bacteria  normal  0.645433  n/a   
 
 
-
 
NC_013093  Amir_4093  protein of unknown function DUF899 thioredoxin family protein  38.3 
 
 
257 aa  75.1  0.000000000001  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc1113  hypothetical protein  27.8 
 
 
244 aa  73.6  0.000000000002  Ralstonia solanacearum GMI1000  Bacteria  hitchhiker  0.0000287552  normal  0.212062 
 
 
-
 
NC_010682  Rpic_0955  protein of unknown function DUF899 thioredoxin family protein  27.8 
 
 
255 aa  73.9  0.000000000002  Ralstonia pickettii 12J  Bacteria  decreased coverage  0.000224117  normal  0.0204099 
 
 
-
 
NC_012850  Rleg_2672  protein of unknown function DUF899 thioredoxin family protein  34.17 
 
 
265 aa  73.9  0.000000000002  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.087051  normal 
 
 
-
 
NC_009074  BURPS668_2407  hypothetical protein  34.59 
 
 
254 aa  73.2  0.000000000003  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_4051  protein of unknown function DUF899 thioredoxin family protein  34.72 
 
 
238 aa  73.2  0.000000000003  Conexibacter woesei DSM 14684  Bacteria  normal  0.541879  normal 
 
 
-
 
NC_009719  Plav_0967  protein of unknown function DUF899 thioredoxin family protein  25.44 
 
 
266 aa  72.8  0.000000000004  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_010622  Bphy_1818  protein of unknown function DUF899 thioredoxin family protein  24.65 
 
 
258 aa  72.8  0.000000000005  Burkholderia phymatum STM815  Bacteria  normal  normal  0.229326 
 
 
-
 
NC_013595  Sros_0313  protein of unknown function DUF899, thioredoxin family protein  29.38 
 
 
234 aa  72  0.000000000008  Streptosporangium roseum DSM 43021  Bacteria  normal  0.316291  normal 
 
 
-
 
NC_013739  Cwoe_0616  protein of unknown function DUF899 thioredoxin family protein  31.62 
 
 
244 aa  70.9  0.00000000001  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_4114  protein of unknown function DUF899 thioredoxin family protein  29.94 
 
 
232 aa  71.2  0.00000000001  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008687  Pden_3150  protein of unknown function DUF899, thioredoxin family protein  28.37 
 
 
228 aa  70.9  0.00000000002  Paracoccus denitrificans PD1222  Bacteria  normal  0.3957  normal 
 
 
-
 
NC_010501  PputW619_2423  protein of unknown function DUF899 thioredoxin family protein  27.98 
 
 
240 aa  70.9  0.00000000002  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_1052  protein of unknown function DUF899 thioredoxin family protein  30.3 
 
 
244 aa  70.1  0.00000000002  Ralstonia pickettii 12D  Bacteria  decreased coverage  0.0000759433  normal  0.0411864 
 
 
-
 
NC_013132  Cpin_5073  protein of unknown function DUF899 thioredoxin family protein  27.8 
 
 
257 aa  70.5  0.00000000002  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.309281 
 
 
-
 
NC_007974  Rmet_5691  Thioredoxin-(TRX) like protein  34.26 
 
 
257 aa  68.9  0.00000000007  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_008254  Meso_0994  protein of unknown function DUF899, thioredoxin-like  27.06 
 
 
230 aa  68.9  0.00000000007  Chelativorans sp. BNC1  Bacteria  normal  0.617473  n/a   
 
 
-
 
NC_009511  Swit_4847  protein of unknown function DUF899, thioredoxin family protein  28.04 
 
 
232 aa  67.8  0.0000000002  Sphingomonas wittichii RW1  Bacteria  normal  0.890001  normal 
 
 
-
 
NC_009512  Pput_2838  protein of unknown function DUF899, thioredoxin family protein  27.59 
 
 
242 aa  67  0.0000000002  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_2930  protein of unknown function DUF899 thioredoxin family protein  27.23 
 
 
242 aa  66.2  0.0000000004  Pseudomonas putida GB-1  Bacteria  normal  0.0915809  normal 
 
 
-
 
NC_010571  Oter_1120  protein of unknown function DUF899 thioredoxin family protein  24.79 
 
 
255 aa  65.5  0.0000000008  Opitutus terrae PB90-1  Bacteria  normal  0.845811  normal 
 
 
-
 
NC_010625  Bphy_6464  protein of unknown function DUF899 thioredoxin family protein  30.09 
 
 
256 aa  65.1  0.0000000009  Burkholderia phymatum STM815  Bacteria  normal  normal  0.586164 
 
 
-
 
NC_008009  Acid345_1333  protein of unknown function DUF899, thioredoxin-like  26.76 
 
 
266 aa  60.8  0.00000002  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.726839  normal 
 
 
-
 
NC_013172  Bfae_00900  hypothetical protein  25.87 
 
 
232 aa  57.8  0.0000001  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_1280  protein of unknown function DUF899 thioredoxin family protein  29.05 
 
 
253 aa  56.6  0.0000003  Sinorhizobium medicae WSM419  Bacteria  normal  0.127918  normal  0.405689 
 
 
-
 
NC_013739  Cwoe_0865  protein of unknown function DUF899 thioredoxin family protein  28.99 
 
 
223 aa  57  0.0000003  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_012792  Vapar_6078  protein of unknown function DUF899 thioredoxin family protein  29.61 
 
 
265 aa  56.2  0.0000004  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_010625  Bphy_7225  protein of unknown function DUF899 thioredoxin family protein  28.5 
 
 
261 aa  55.8  0.0000006  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_1073  protein of unknown function DUF899 thioredoxin family protein  31.09 
 
 
241 aa  55.1  0.0000009  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_3564  protein of unknown function DUF899 thioredoxin family protein  26.19 
 
 
229 aa  54.7  0.000001  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.236943  n/a   
 
 
-
 
NC_008726  Mvan_0692  protein of unknown function DUF899, thioredoxin family protein  26.64 
 
 
241 aa  52.4  0.000005  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.0179397 
 
 
-
 
NC_008726  Mvan_2972  protein of unknown function DUF899, thioredoxin family protein  24.88 
 
 
228 aa  51.2  0.00001  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.169644  normal  0.281677 
 
 
-
 
NC_012669  Bcav_0282  protein of unknown function DUF899 thioredoxin family protein  25.6 
 
 
233 aa  50.4  0.00002  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.0258482 
 
 
-
 
NC_012850  Rleg_2487  protein of unknown function DUF899 thioredoxin family protein  26.57 
 
 
262 aa  48.9  0.00007  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_0337  protein of unknown function DUF899, thioredoxin-like protein  24.88 
 
 
229 aa  48.5  0.00008  Mycobacterium sp. MCS  Bacteria  normal  0.0510576  n/a   
 
 
-
 
NC_008705  Mkms_0347  protein of unknown function DUF899, thioredoxin family protein  24.88 
 
 
229 aa  48.5  0.00008  Mycobacterium sp. KMS  Bacteria  normal  normal  0.33372 
 
 
-
 
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