105 homologs were found in PanDaTox collection
for query gene RPD_2218 on replicon NC_007958
Organism: Rhodopseudomonas palustris BisB5



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007958  RPD_2218  protein of unknown function DUF899, thioredoxin-like  100 
 
 
231 aa  471  1e-132  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.797158  normal  0.442221 
 
 
-
 
NC_007778  RPB_3245  hypothetical protein  87.01 
 
 
231 aa  412  1e-114  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_011366  Rleg2_5933  protein of unknown function DUF899 thioredoxin family protein  71.49 
 
 
233 aa  340  8e-93  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.10378  normal  0.102215 
 
 
-
 
NC_012858  Rleg_6928  protein of unknown function DUF899 thioredoxin family protein  70.18 
 
 
233 aa  339  2e-92  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.135694  normal 
 
 
-
 
NC_010623  Bphy_5454  protein of unknown function DUF899 thioredoxin family protein  71.18 
 
 
236 aa  337  9.999999999999999e-92  Burkholderia phymatum STM815  Bacteria  normal  normal  0.0299136 
 
 
-
 
NC_007650  BTH_II1767  hypothetical protein  71.11 
 
 
236 aa  322  3e-87  Burkholderia thailandensis E264  Bacteria  hitchhiker  0.000442261  n/a   
 
 
-
 
NC_007435  BURPS1710b_A2205  hypothetical protein  70.35 
 
 
236 aa  321  6e-87  Burkholderia pseudomallei 1710b  Bacteria  unclonable  0.000000000209346  n/a   
 
 
-
 
NC_006349  BMAA0828  hypothetical protein  70.35 
 
 
236 aa  320  9.999999999999999e-87  Burkholderia mallei ATCC 23344  Bacteria  hitchhiker  0.0000230425  n/a   
 
 
-
 
NC_008835  BMA10229_0045  hypothetical protein  70.35 
 
 
236 aa  320  9.999999999999999e-87  Burkholderia mallei NCTC 10229  Bacteria  hitchhiker  0.0000000000431681  n/a   
 
 
-
 
NC_009075  BURPS668_A0952  hypothetical protein  70.35 
 
 
236 aa  320  9.999999999999999e-87  Burkholderia pseudomallei 668  Bacteria  hitchhiker  0.00000000155269  n/a   
 
 
-
 
NC_009079  BMA10247_A1575  hypothetical protein  70.35 
 
 
236 aa  320  9.999999999999999e-87  Burkholderia mallei NCTC 10247  Bacteria  hitchhiker  0.0000230171  n/a   
 
 
-
 
NC_009078  BURPS1106A_A0859  hypothetical protein  69.91 
 
 
236 aa  318  5e-86  Burkholderia pseudomallei 1106a  Bacteria  normal  0.0194115  n/a   
 
 
-
 
NC_007348  Reut_B4359  hypothetical protein  64.91 
 
 
232 aa  313  1.9999999999999998e-84  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010676  Bphyt_4678  protein of unknown function DUF899 thioredoxin family protein  63.91 
 
 
243 aa  303  1.0000000000000001e-81  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B0953  hypothetical protein  62.72 
 
 
242 aa  286  2e-76  Burkholderia xenovorans LB400  Bacteria  normal  0.920256  normal 
 
 
-
 
NC_009636  Smed_1983  protein of unknown function DUF899 thioredoxin family protein  62.88 
 
 
235 aa  284  9e-76  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_007964  Nham_2749  protein of unknown function DUF899, thioredoxin-like  46.81 
 
 
239 aa  206  3e-52  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_1614  hypothetical protein  39.01 
 
 
226 aa  122  4e-27  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_2183  protein of unknown function DUF899 thioredoxin family protein  36.19 
 
 
230 aa  121  9.999999999999999e-27  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.0511946 
 
 
-
 
NC_007948  Bpro_1368  protein of unknown function DUF899, thioredoxin-like  29.67 
 
 
273 aa  91.7  8e-18  Polaromonas sp. JS666  Bacteria  normal  normal  0.836068 
 
 
-
 
NC_009656  PSPA7_4033  hypothetical protein  33.33 
 
 
249 aa  90.9  1e-17  Pseudomonas aeruginosa PA7  Bacteria  normal  0.179526  n/a   
 
 
-
 
NC_008146  Mmcs_3906  protein of unknown function DUF899, thioredoxin-like protein  29.06 
 
 
223 aa  87  2e-16  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_3980  protein of unknown function DUF899, thioredoxin family protein  29.06 
 
 
223 aa  87  2e-16  Mycobacterium sp. KMS  Bacteria  normal  0.590341  normal 
 
 
-
 
NC_008726  Mvan_4382  protein of unknown function DUF899, thioredoxin family protein  30.54 
 
 
224 aa  86.3  3e-16  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_46820  hypothetical protein  32.87 
 
 
249 aa  85.9  4e-16  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.0659228  decreased coverage  0.000000227534 
 
 
-
 
NC_007510  Bcep18194_A5303  protein of unknown function DUF899, thioredoxin-like  35.51 
 
 
254 aa  85.9  5e-16  Burkholderia sp. 383  Bacteria  normal  0.789513  normal  0.132054 
 
 
-
 
NC_009077  Mjls_3921  protein of unknown function DUF899, thioredoxin family protein  29.06 
 
 
223 aa  85.9  5e-16  Mycobacterium sp. JLS  Bacteria  normal  0.0512344  normal  0.178262 
 
 
-
 
NC_009338  Mflv_2284  protein of unknown function DUF899, thioredoxin family protein  31.03 
 
 
224 aa  85.5  6e-16  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.41995 
 
 
-
 
NC_007952  Bxe_B0544  hypothetical protein  37.07 
 
 
255 aa  83.2  0.000000000000003  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.457717 
 
 
-
 
NC_008390  Bamb_2026  protein of unknown function DUF899, thioredoxin family protein  35.97 
 
 
254 aa  83.2  0.000000000000003  Burkholderia ambifaria AMMD  Bacteria  normal  0.517928  n/a   
 
 
-
 
NC_010551  BamMC406_1895  protein of unknown function DUF899 thioredoxin family protein  35.25 
 
 
254 aa  83.2  0.000000000000003  Burkholderia ambifaria MC40-6  Bacteria  normal  0.814935  normal 
 
 
-
 
NC_009439  Pmen_1335  protein of unknown function DUF899, thioredoxin family protein  28.38 
 
 
260 aa  81.6  0.00000000000001  Pseudomonas mendocina ymp  Bacteria  normal  0.146435  normal 
 
 
-
 
NC_010084  Bmul_1283  protein of unknown function DUF899 thioredoxin family protein  37.5 
 
 
254 aa  80.5  0.00000000000002  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.0515883  normal  0.391418 
 
 
-
 
NC_007953  Bxe_C0023  hypothetical protein  37.07 
 
 
253 aa  78.2  0.00000000000009  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.428755 
 
 
-
 
NC_008009  Acid345_1332  protein of unknown function DUF899, thioredoxin-like  36.36 
 
 
272 aa  78.2  0.0000000000001  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_1313  protein of unknown function DUF899 thioredoxin family protein  33.08 
 
 
256 aa  78.2  0.0000000000001  Ralstonia pickettii 12J  Bacteria  normal  normal  0.603997 
 
 
-
 
NC_008687  Pden_3150  protein of unknown function DUF899, thioredoxin family protein  27.6 
 
 
228 aa  77  0.0000000000002  Paracoccus denitrificans PD1222  Bacteria  normal  0.3957  normal 
 
 
-
 
NC_012850  Rleg_0929  protein of unknown function DUF899 thioredoxin family protein  29.3 
 
 
242 aa  76.6  0.0000000000003  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.312824  normal  0.683768 
 
 
-
 
NC_012856  Rpic12D_1377  protein of unknown function DUF899 thioredoxin family protein  32.33 
 
 
256 aa  75.9  0.0000000000004  Ralstonia pickettii 12D  Bacteria  normal  0.349929  normal 
 
 
-
 
NC_009380  Strop_2736  protein of unknown function DUF899, thioredoxin family protein  28.5 
 
 
222 aa  75.9  0.0000000000005  Salinispora tropica CNB-440  Bacteria  normal  0.0311425  normal  0.559549 
 
 
-
 
NC_008062  Bcen_6084  protein of unknown function DUF899, thioredoxin-like  35.83 
 
 
254 aa  75.5  0.0000000000006  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.766101  n/a   
 
 
-
 
NC_008542  Bcen2424_1993  protein of unknown function DUF899, thioredoxin family protein  35.83 
 
 
254 aa  75.5  0.0000000000006  Burkholderia cenocepacia HI2424  Bacteria  normal  0.255854  n/a   
 
 
-
 
NC_009636  Smed_0353  protein of unknown function DUF899 thioredoxin family protein  31.39 
 
 
255 aa  75.9  0.0000000000006  Sinorhizobium medicae WSM419  Bacteria  decreased coverage  0.00646248  normal  0.96044 
 
 
-
 
NC_010508  Bcenmc03_2013  protein of unknown function DUF899 thioredoxin family protein  35.83 
 
 
254 aa  75.5  0.0000000000006  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0767296  normal 
 
 
-
 
NC_010676  Bphyt_4116  protein of unknown function DUF899 thioredoxin family protein  34.17 
 
 
255 aa  75.9  0.0000000000006  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_0955  protein of unknown function DUF899 thioredoxin family protein  27.62 
 
 
255 aa  75.5  0.0000000000006  Ralstonia pickettii 12J  Bacteria  decreased coverage  0.000224117  normal  0.0204099 
 
 
-
 
NC_009511  Swit_4488  protein of unknown function DUF899, thioredoxin family protein  28.95 
 
 
246 aa  75.5  0.0000000000007  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.394996 
 
 
-
 
NC_009511  Swit_4847  protein of unknown function DUF899, thioredoxin family protein  27.98 
 
 
232 aa  74.7  0.000000000001  Sphingomonas wittichii RW1  Bacteria  normal  0.890001  normal 
 
 
-
 
NC_009668  Oant_3485  protein of unknown function DUF899 thioredoxin family protein  28.37 
 
 
241 aa  74.7  0.000000000001  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.895959  n/a   
 
 
-
 
NC_011369  Rleg2_0816  protein of unknown function DUF899 thioredoxin family protein  26.89 
 
 
242 aa  74.7  0.000000000001  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  decreased coverage  0.00565144  normal  0.265134 
 
 
-
 
NC_007434  BURPS1710b_2551  hypothetical protein  30.86 
 
 
254 aa  74.3  0.000000000002  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_1526  protein of unknown function DUF899 thioredoxin family protein  29.52 
 
 
245 aa  73.9  0.000000000002  Burkholderia phytofirmans PsJN  Bacteria  normal  0.899756  normal 
 
 
-
 
NC_007948  Bpro_0083  protein of unknown function DUF899, thioredoxin-like  25.86 
 
 
265 aa  73.6  0.000000000003  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_5691  Thioredoxin-(TRX) like protein  36.11 
 
 
257 aa  72.8  0.000000000004  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_009076  BURPS1106A_2459  hypothetical protein  30.86 
 
 
254 aa  72.8  0.000000000004  Burkholderia pseudomallei 1106a  Bacteria  normal  0.0588117  n/a   
 
 
-
 
NC_006348  BMA1526  hypothetical protein  30.86 
 
 
254 aa  72.8  0.000000000005  Burkholderia mallei ATCC 23344  Bacteria  normal  0.153792  n/a   
 
 
-
 
NC_013739  Cwoe_4051  protein of unknown function DUF899 thioredoxin family protein  34.06 
 
 
238 aa  72.4  0.000000000005  Conexibacter woesei DSM 14684  Bacteria  normal  0.541879  normal 
 
 
-
 
NC_008785  BMASAVP1_A2026  hypothetical protein  30.86 
 
 
254 aa  72.8  0.000000000005  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A3286  hypothetical protein  30.86 
 
 
254 aa  72.8  0.000000000005  Burkholderia mallei NCTC 10229  Bacteria  normal  0.0189775  n/a   
 
 
-
 
NC_009080  BMA10247_1297  hypothetical protein  30.86 
 
 
254 aa  72.8  0.000000000005  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_4093  protein of unknown function DUF899 thioredoxin family protein  37.32 
 
 
257 aa  72.4  0.000000000005  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_2485  protein of unknown function DUF899 thioredoxin family protein  28.57 
 
 
245 aa  71.6  0.000000000008  Caulobacter sp. K31  Bacteria  normal  0.267783  normal 
 
 
-
 
NC_009074  BURPS668_2407  hypothetical protein  32.85 
 
 
254 aa  71.2  0.00000000001  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_012856  Rpic12D_1052  protein of unknown function DUF899 thioredoxin family protein  26.42 
 
 
244 aa  71.2  0.00000000001  Ralstonia pickettii 12D  Bacteria  decreased coverage  0.0000759433  normal  0.0411864 
 
 
-
 
NC_007492  Pfl01_1441  hypothetical protein  29.28 
 
 
244 aa  70.9  0.00000000002  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_2423  protein of unknown function DUF899 thioredoxin family protein  25.46 
 
 
240 aa  69.7  0.00000000004  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_013037  Dfer_2074  protein of unknown function DUF899 thioredoxin family protein  29.55 
 
 
258 aa  69.7  0.00000000004  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_2342  protein of unknown function DUF899 thioredoxin family protein  31.67 
 
 
265 aa  69.3  0.00000000005  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.140568 
 
 
-
 
NC_009485  BBta_6459  hypothetical protein  30.43 
 
 
253 aa  68.9  0.00000000007  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.335869  normal  0.619063 
 
 
-
 
NC_009719  Plav_0967  protein of unknown function DUF899 thioredoxin family protein  26.2 
 
 
266 aa  68.6  0.00000000008  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_012792  Vapar_6317  protein of unknown function DUF899 thioredoxin family protein  26.92 
 
 
265 aa  68.2  0.0000000001  Variovorax paradoxus S110  Bacteria  normal  0.645433  n/a   
 
 
-
 
NC_007651  BTH_I2055  hypothetical protein  29.93 
 
 
254 aa  67.4  0.0000000002  Burkholderia thailandensis E264  Bacteria  normal  0.478815  n/a   
 
 
-
 
NC_010625  Bphy_6464  protein of unknown function DUF899 thioredoxin family protein  34.38 
 
 
256 aa  67.4  0.0000000002  Burkholderia phymatum STM815  Bacteria  normal  normal  0.586164 
 
 
-
 
NC_013739  Cwoe_0616  protein of unknown function DUF899 thioredoxin family protein  25.45 
 
 
244 aa  66.6  0.0000000003  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_010622  Bphy_1818  protein of unknown function DUF899 thioredoxin family protein  23.26 
 
 
258 aa  66.6  0.0000000003  Burkholderia phymatum STM815  Bacteria  normal  normal  0.229326 
 
 
-
 
NC_003295  RSc1113  hypothetical protein  26.19 
 
 
244 aa  66.2  0.0000000004  Ralstonia solanacearum GMI1000  Bacteria  hitchhiker  0.0000287552  normal  0.212062 
 
 
-
 
NC_012850  Rleg_2672  protein of unknown function DUF899 thioredoxin family protein  30 
 
 
265 aa  65.9  0.0000000006  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.087051  normal 
 
 
-
 
NC_013093  Amir_4114  protein of unknown function DUF899 thioredoxin family protein  28.08 
 
 
232 aa  65.5  0.0000000007  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009668  Oant_4055  protein of unknown function DUF899 thioredoxin family protein  27.31 
 
 
236 aa  65.1  0.0000000008  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_0313  protein of unknown function DUF899, thioredoxin family protein  27.44 
 
 
234 aa  63.2  0.000000003  Streptosporangium roseum DSM 43021  Bacteria  normal  0.316291  normal 
 
 
-
 
NC_002947  PP_2851  hypothetical protein  24.11 
 
 
242 aa  62.8  0.000000004  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_5073  protein of unknown function DUF899 thioredoxin family protein  26.42 
 
 
257 aa  61.6  0.00000001  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.309281 
 
 
-
 
NC_008009  Acid345_1333  protein of unknown function DUF899, thioredoxin-like  25.35 
 
 
266 aa  59.7  0.00000004  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.726839  normal 
 
 
-
 
NC_009719  Plav_1073  protein of unknown function DUF899 thioredoxin family protein  29.2 
 
 
241 aa  59.3  0.00000004  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_2930  protein of unknown function DUF899 thioredoxin family protein  25.22 
 
 
242 aa  59.3  0.00000005  Pseudomonas putida GB-1  Bacteria  normal  0.0915809  normal 
 
 
-
 
NC_009512  Pput_2838  protein of unknown function DUF899, thioredoxin family protein  23.5 
 
 
242 aa  58.5  0.00000009  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_1280  protein of unknown function DUF899 thioredoxin family protein  28.02 
 
 
253 aa  58.2  0.0000001  Sinorhizobium medicae WSM419  Bacteria  normal  0.127918  normal  0.405689 
 
 
-
 
NC_010625  Bphy_7225  protein of unknown function DUF899 thioredoxin family protein  27.54 
 
 
261 aa  57.8  0.0000002  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_010571  Oter_1120  protein of unknown function DUF899 thioredoxin family protein  23.28 
 
 
255 aa  56.6  0.0000003  Opitutus terrae PB90-1  Bacteria  normal  0.845811  normal 
 
 
-
 
NC_013172  Bfae_00900  hypothetical protein  25.74 
 
 
232 aa  56.2  0.0000004  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_0865  protein of unknown function DUF899 thioredoxin family protein  27.88 
 
 
223 aa  55.8  0.0000006  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_3564  protein of unknown function DUF899 thioredoxin family protein  27.36 
 
 
229 aa  54.7  0.000001  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.236943  n/a   
 
 
-
 
NC_008726  Mvan_0692  protein of unknown function DUF899, thioredoxin family protein  25.12 
 
 
241 aa  53.5  0.000003  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.0179397 
 
 
-
 
NC_012792  Vapar_6078  protein of unknown function DUF899 thioredoxin family protein  27.54 
 
 
265 aa  52.8  0.000005  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_2972  protein of unknown function DUF899, thioredoxin family protein  25.24 
 
 
228 aa  52  0.000007  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.169644  normal  0.281677 
 
 
-
 
NC_012850  Rleg_2487  protein of unknown function DUF899 thioredoxin family protein  26.09 
 
 
262 aa  51.2  0.00001  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_1169  protein of unknown function DUF899, thioredoxin family protein  27.96 
 
 
231 aa  50.4  0.00002  Mycobacterium sp. JLS  Bacteria  normal  0.768824  normal  0.199001 
 
 
-
 
NC_008146  Mmcs_0337  protein of unknown function DUF899, thioredoxin-like protein  25.25 
 
 
229 aa  50.4  0.00003  Mycobacterium sp. MCS  Bacteria  normal  0.0510576  n/a   
 
 
-
 
NC_008705  Mkms_0347  protein of unknown function DUF899, thioredoxin family protein  25.25 
 
 
229 aa  50.4  0.00003  Mycobacterium sp. KMS  Bacteria  normal  normal  0.33372 
 
 
-
 
NC_011369  Rleg2_2194  protein of unknown function DUF899 thioredoxin family protein  25.84 
 
 
261 aa  50.1  0.00003  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.167209  normal  0.0853422 
 
 
-
 
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