Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_1983 |
Symbol | |
ID | 5322842 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 2034932 |
End bp | 2035639 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640790921 |
Product | protein of unknown function DUF899 thioredoxin family protein |
Protein accession | YP_001327652 |
Protein GI | 150397185 |
COG category | [S] Function unknown |
COG ID | [COG4312] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGACCC AGACCACGCT GATCCCCGCA ACGGAACTGG CGGCGCGCAA CCGCGCCCGC TTCCCCAACG AAAGCGCCGA GTACCGGCAA GCCCGAAACG CGCTGCTCGC CGAAGAGATC GAATTGAGGC GCCACCTCGA GCGGGTGGCG GAAATGCGAA GACGACTGCC GCCCGGCGGT GAAGTGGCGA AGACGTACCG CTTTGAGAGC GAGTACGGGG CCGTCACGCT AGCCGATCTC TTCGGCGAGA GGGACACCCT CATCGTCTAC AGCTACATGT TTGGTCCGCA ACGCGAAAAG CCTTGCCCTA TGTGCACCTC CCTGATGGCG GCTTGGGAAG GAAAATTGCC AGATATCGAG CAGCGCGTGT CACTCGCTAT GGTCGCCCGT TCGCCGATCG AAAGATTGCT CGCCGCAAAG ATGGCTCGTG GCTGGACCCA GTTGAAGGTC TACTCCGATA GCGACGGGGA CTTCACCCGC GATTATGTCA GTGCCGGCGA CGAAGATGTT CCGGGCTACA CCGTGTTTAC GCGCAAGGAC GGAACGATCC GGCATTTCTG GAGCGCGGAG ATCAGCAACG AGATGGCCGA TCCGGGCCAG GACCCTCGTG ATGCACCGGA TCCGGACCCT CTTTGGACCC TGCTCGACAC CACACCCGAA GGCCGGGGCG GCGACTGGTA CCCGAAACTC GAATACCGTA ACGGCTGA
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Protein sequence | MATQTTLIPA TELAARNRAR FPNESAEYRQ ARNALLAEEI ELRRHLERVA EMRRRLPPGG EVAKTYRFES EYGAVTLADL FGERDTLIVY SYMFGPQREK PCPMCTSLMA AWEGKLPDIE QRVSLAMVAR SPIERLLAAK MARGWTQLKV YSDSDGDFTR DYVSAGDEDV PGYTVFTRKD GTIRHFWSAE ISNEMADPGQ DPRDAPDPDP LWTLLDTTPE GRGGDWYPKL EYRNG
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