Gene Smed_1983 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_1983 
Symbol 
ID5322842 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2034932 
End bp2035639 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content62% 
IMG OID640790921 
Productprotein of unknown function DUF899 thioredoxin family protein 
Protein accessionYP_001327652 
Protein GI150397185 
COG category[S] Function unknown 
COG ID[COG4312] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACCC AGACCACGCT GATCCCCGCA ACGGAACTGG CGGCGCGCAA CCGCGCCCGC 
TTCCCCAACG AAAGCGCCGA GTACCGGCAA GCCCGAAACG CGCTGCTCGC CGAAGAGATC
GAATTGAGGC GCCACCTCGA GCGGGTGGCG GAAATGCGAA GACGACTGCC GCCCGGCGGT
GAAGTGGCGA AGACGTACCG CTTTGAGAGC GAGTACGGGG CCGTCACGCT AGCCGATCTC
TTCGGCGAGA GGGACACCCT CATCGTCTAC AGCTACATGT TTGGTCCGCA ACGCGAAAAG
CCTTGCCCTA TGTGCACCTC CCTGATGGCG GCTTGGGAAG GAAAATTGCC AGATATCGAG
CAGCGCGTGT CACTCGCTAT GGTCGCCCGT TCGCCGATCG AAAGATTGCT CGCCGCAAAG
ATGGCTCGTG GCTGGACCCA GTTGAAGGTC TACTCCGATA GCGACGGGGA CTTCACCCGC
GATTATGTCA GTGCCGGCGA CGAAGATGTT CCGGGCTACA CCGTGTTTAC GCGCAAGGAC
GGAACGATCC GGCATTTCTG GAGCGCGGAG ATCAGCAACG AGATGGCCGA TCCGGGCCAG
GACCCTCGTG ATGCACCGGA TCCGGACCCT CTTTGGACCC TGCTCGACAC CACACCCGAA
GGCCGGGGCG GCGACTGGTA CCCGAAACTC GAATACCGTA ACGGCTGA
 
Protein sequence
MATQTTLIPA TELAARNRAR FPNESAEYRQ ARNALLAEEI ELRRHLERVA EMRRRLPPGG 
EVAKTYRFES EYGAVTLADL FGERDTLIVY SYMFGPQREK PCPMCTSLMA AWEGKLPDIE
QRVSLAMVAR SPIERLLAAK MARGWTQLKV YSDSDGDFTR DYVSAGDEDV PGYTVFTRKD
GTIRHFWSAE ISNEMADPGQ DPRDAPDPDP LWTLLDTTPE GRGGDWYPKL EYRNG