Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_46820 |
Symbol | |
ID | 4383063 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 4169787 |
End bp | 4170536 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639326330 |
Product | hypothetical protein |
Protein accession | YP_791895 |
Protein GI | 116049302 |
COG category | [S] Function unknown |
COG ID | [COG4312] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.0659228 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.000000227534 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGAATCCTT CTTTGCAGGA CCACCCGGTG AGCAACCGGG AACAATGGCT GGACGCCCGT CGCCGTCTGC TGGCGCGGGA AAAGCAACTC ACCCGCCTGC GCGACCAGGT CGCCGCCGAA CGACGCGAAC TGCCCTGGGT CAGGGTGGAC AAGGACTACC GCTTCCAGGG CGAGCGCGGC GAGCGTTCGC TGGCCGAGTT GTTCGGCGGC AATAGCCAGC TAATCGTCTA CCACTTCATG TTCGCGCCGG GCTGGAGCGA AGGCTGCGTC GGCTGTTCGT TCCTCGCCGA CCACATCGAC GGCGCCAACC GGCACCTGGC GCACCACGAC GTCAGCCTGG TGGCGGTATC GCGCGCGCCC CTGGAGGAGT TCCAGGCGTT CCGCCGGCGC ATGGGCTGGC GTTTCGACTG GTACTCCTCG TACGGCAGCG ATTTCAACCG TGACTTCGGG GTGTCCTTCG ACAAGGCGCA ACTGGCCGCC GGCAGCGTCG ACTACAACTA CCAGCCGACC CCCGACGCCG GCGAGGAAAT GCCGGGTGCC AGCGTGTTCC TGCGCAATCC GGCGGGCGAG GTGTTCCACA CCTATTCGGC CTATGCGCGC GGCCTCGACA TCCTGCTCAC CACCTACACC TTCCTCGACC TGACGCCCAA GGGGCGCAAC GAGGACGCGA TCATGGACTG GCTGCGTCAC CACGACCGCT ACGACGAGGC GCCGAAAAGC GCCTGCTGCC ACGCGCAGGC CAGCCATTGA
|
Protein sequence | MNPSLQDHPV SNREQWLDAR RRLLAREKQL TRLRDQVAAE RRELPWVRVD KDYRFQGERG ERSLAELFGG NSQLIVYHFM FAPGWSEGCV GCSFLADHID GANRHLAHHD VSLVAVSRAP LEEFQAFRRR MGWRFDWYSS YGSDFNRDFG VSFDKAQLAA GSVDYNYQPT PDAGEEMPGA SVFLRNPAGE VFHTYSAYAR GLDILLTTYT FLDLTPKGRN EDAIMDWLRH HDRYDEAPKS ACCHAQASH
|
| |