96 homologs were found in PanDaTox collection
for query gene Swoo_0219 on replicon NC_010506
Organism: Shewanella woodyi ATCC 51908



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010506  Swoo_0219  phenylacetate-CoA oxygenase, PaaI subunit  100 
 
 
248 aa  512  1e-144  Shewanella woodyi ATCC 51908  Bacteria  normal  normal  0.0174544 
 
 
-
 
NC_009485  BBta_2867  phenylacetic acid degradation protein paaC  46.75 
 
 
258 aa  230  2e-59  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.212868  normal  0.316669 
 
 
-
 
NC_014230  CA2559_05320  Phenylacetate-CoA oxygenase, PaaI subunit  43.37 
 
 
251 aa  227  1e-58  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.575259  n/a   
 
 
-
 
NC_007348  Reut_B3737  phenylacetate-CoA oxygenase, PaaI subunit  46.4 
 
 
250 aa  226  3e-58  Ralstonia eutropha JMP134  Bacteria  normal  0.223474  n/a   
 
 
-
 
NC_007778  RPB_3639  phenylacetate-CoA oxygenase, PaaI subunit  44.58 
 
 
258 aa  224  9e-58  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.330686 
 
 
-
 
NC_007958  RPD_1826  phenylacetate-CoA oxygenase, PaaI subunit  45.93 
 
 
258 aa  223  3e-57  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.0299219  normal 
 
 
-
 
NC_009720  Xaut_0898  phenylacetate-CoA oxygenase, PaaI subunit  46.34 
 
 
258 aa  221  9e-57  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_4287  phenylacetate-CoA oxygenase, PaaI subunit  46.22 
 
 
258 aa  219  1.9999999999999999e-56  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.129716  n/a   
 
 
-
 
NC_008542  Bcen2424_0328  phenylacetate-CoA oxygenase, PaaI subunit  44.23 
 
 
267 aa  218  6e-56  Burkholderia cenocepacia HI2424  Bacteria  normal  0.0719098  n/a   
 
 
-
 
NC_008060  Bcen_2778  phenylacetate-CoA oxygenase, PaaI subunit  44.23 
 
 
267 aa  218  6e-56  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.0393983  n/a   
 
 
-
 
NC_010508  Bcenmc03_0308  phenylacetate-CoA oxygenase, PaaI subunit  44.23 
 
 
267 aa  218  1e-55  Burkholderia cenocepacia MC0-3  Bacteria  hitchhiker  0.000247438  hitchhiker  0.00132026 
 
 
-
 
NC_008709  Ping_0652  phenylacetate-CoA oxygenase, PaaI subunit  46.53 
 
 
252 aa  217  2e-55  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_4071  phenylacetate-CoA oxygenase, PaaI subunit  44.31 
 
 
267 aa  215  4e-55  Salinispora tropica CNB-440  Bacteria  normal  0.421064  normal  0.190535 
 
 
-
 
NC_010622  Bphy_2859  phenylacetate-CoA oxygenase, PaaI subunit  43.46 
 
 
267 aa  215  5.9999999999999996e-55  Burkholderia phymatum STM815  Bacteria  normal  hitchhiker  0.00441698 
 
 
-
 
NC_009953  Sare_4470  phenylacetate-CoA oxygenase, PaaI subunit  44.44 
 
 
253 aa  215  7e-55  Salinispora arenicola CNS-205  Bacteria  normal  normal 
 
 
-
 
NC_013501  Rmar_1545  phenylacetate-CoA oxygenase, PaaI subunit  45.42 
 
 
260 aa  214  8e-55  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_0689  phenylacetate-CoA oxygenase, PaaI subunit  43.9 
 
 
258 aa  214  8e-55  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_010084  Bmul_0230  phenylacetate-CoA oxygenase, PaaI subunit  43.85 
 
 
267 aa  212  4.9999999999999996e-54  Burkholderia multivorans ATCC 17616  Bacteria  hitchhiker  0.000135913  hitchhiker  0.00143113 
 
 
-
 
NC_008578  Acel_1441  phenylacetate-CoA oxygenase, PaaI subunit  46.15 
 
 
252 aa  211  1e-53  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_7197  phenylacetate-CoA oxygenase, PaaI subunit  45.9 
 
 
256 aa  210  2e-53  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_3664  phenylacetate-CoA oxygenase, PaaI subunit  41.15 
 
 
267 aa  209  3e-53  Burkholderia phytofirmans PsJN  Bacteria  normal  0.19966  hitchhiker  0.000000312468 
 
 
-
 
NC_010551  BamMC406_0256  phenylacetate-CoA oxygenase, PaaI subunit  43.56 
 
 
267 aa  209  5e-53  Burkholderia ambifaria MC40-6  Bacteria  hitchhiker  0.00364013  normal  0.0307686 
 
 
-
 
NC_011894  Mnod_3354  phenylacetate-CoA oxygenase, PaaI subunit  43.15 
 
 
284 aa  206  2e-52  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.314155  n/a   
 
 
-
 
NC_007510  Bcep18194_A3427  phenylacetate-CoA oxygenase, PaaI subunit  44.23 
 
 
267 aa  206  4e-52  Burkholderia sp. 383  Bacteria  hitchhiker  0.0000694347  normal  0.842688 
 
 
-
 
NC_008786  Veis_3947  phenylacetate-CoA oxygenase, PaaI subunit  43.67 
 
 
258 aa  205  6e-52  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.88088  normal  0.372125 
 
 
-
 
NC_012791  Vapar_1233  phenylacetate-CoA oxygenase, PaaI subunit  42.51 
 
 
259 aa  204  1e-51  Variovorax paradoxus S110  Bacteria  normal  0.829898  n/a   
 
 
-
 
NC_007951  Bxe_A0293  phenylacetic acid degradation protein PaaC  40.38 
 
 
267 aa  203  2e-51  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_1746  phenylacetate-CoA oxygenase, PaaI subunit  45.53 
 
 
256 aa  203  2e-51  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.951636 
 
 
-
 
NC_008825  Mpe_A0989  putative ring-hydroxylation complex protein 2  43.67 
 
 
257 aa  203  2e-51  Methylibium petroleiphilum PM1  Bacteria  normal  0.142392  normal 
 
 
-
 
NC_008541  Arth_3216  phenylacetate-CoA oxygenase, PaaI subunit  47.18 
 
 
288 aa  203  2e-51  Arthrobacter sp. FB24  Bacteria  normal  0.105591  n/a   
 
 
-
 
NC_009484  Acry_2610  phenylacetate-CoA oxygenase, PaaI subunit  44.72 
 
 
269 aa  203  2e-51  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_008390  Bamb_0247  phenylacetate-CoA oxygenase, PaaI subunit  45.38 
 
 
267 aa  203  2e-51  Burkholderia ambifaria AMMD  Bacteria  normal  0.185899  n/a   
 
 
-
 
NC_008688  Pden_4808  phenylacetate-CoA oxygenase, PaaI subunit  44.35 
 
 
270 aa  202  3e-51  Paracoccus denitrificans PD1222  Bacteria  normal  0.364827  normal  0.548866 
 
 
-
 
CP001637  EcDH1_2255  phenylacetate-CoA oxygenase, PaaI subunit  44.72 
 
 
248 aa  202  3e-51  Escherichia coli DH1  Bacteria  normal  0.861974  n/a   
 
 
-
 
NC_009620  Smed_4149  phenylacetate-CoA oxygenase, PaaI subunit  43.9 
 
 
261 aa  202  3e-51  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.775902 
 
 
-
 
NC_009801  EcE24377A_1575  phenylacetate-CoA oxygenase, PaaI subunit  44.72 
 
 
248 aa  201  7e-51  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_3074  phenylacetate-CoA oxygenase, PaaI subunit  45.53 
 
 
253 aa  201  8e-51  Serratia proteamaculans 568  Bacteria  normal  normal  0.156796 
 
 
-
 
NC_009800  EcHS_A1477  phenylacetate-CoA oxygenase, PaaI subunit  44.31 
 
 
248 aa  201  9.999999999999999e-51  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_2265  phenylacetate-CoA oxygenase, PaaI subunit  44.31 
 
 
248 aa  201  9.999999999999999e-51  Escherichia coli ATCC 8739  Bacteria  normal  0.689488  normal 
 
 
-
 
NC_007347  Reut_A3208  phenylacetate-CoA oxygenase, PaaI subunit  40.77 
 
 
280 aa  200  1.9999999999999998e-50  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I3099  phenylacetate-CoA oxygenase, PaaI subunit  41.54 
 
 
267 aa  198  6e-50  Burkholderia thailandensis E264  Bacteria  normal  0.0237514  n/a   
 
 
-
 
NC_007964  Nham_0930  phenylacetate-CoA oxygenase, PaaI subunit  39.02 
 
 
283 aa  198  6e-50  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_009511  Swit_0755  phenylacetate-CoA oxygenase, PaaI subunit  40.8 
 
 
250 aa  197  2.0000000000000003e-49  Sphingomonas wittichii RW1  Bacteria  normal  0.484402  normal  0.296547 
 
 
-
 
NC_010501  PputW619_2633  phenylacetate-CoA oxygenase, PaaI subunit  42.34 
 
 
252 aa  197  2.0000000000000003e-49  Pseudomonas putida W619  Bacteria  normal  0.301117  normal  0.0854838 
 
 
-
 
NC_009076  BURPS1106A_3838  phenylacetate-CoA oxygenase, PaaI subunit  43.08 
 
 
267 aa  196  4.0000000000000005e-49  Burkholderia pseudomallei 1106a  Bacteria  normal  0.791762  n/a   
 
 
-
 
NC_008699  Noca_3157  phenylacetate-CoA oxygenase, PaaI subunit  42.74 
 
 
247 aa  196  4.0000000000000005e-49  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_0009  phenylacetate-CoA oxygenase, PaaI subunit  42.69 
 
 
267 aa  194  9e-49  Burkholderia pseudomallei 1710b  Bacteria  normal  0.235905  n/a   
 
 
-
 
NC_007298  Daro_0379  phenylacetate-CoA oxygenase, PaaI subunit  41.41 
 
 
260 aa  194  1e-48  Dechloromonas aromatica RCB  Bacteria  normal  0.0229824  hitchhiker  0.00128287 
 
 
-
 
NC_007973  Rmet_3371  phenylacetate-CoA oxygenase PaaI  41.54 
 
 
285 aa  194  1e-48  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_006348  BMA2575  phenylacetic acid degradation protein PaaC  42.69 
 
 
267 aa  194  1e-48  Burkholderia mallei ATCC 23344  Bacteria  normal  0.164193  n/a   
 
 
-
 
NC_010322  PputGB1_2620  phenylacetate-CoA oxygenase, PaaI subunit  42.91 
 
 
252 aa  194  1e-48  Pseudomonas putida GB-1  Bacteria  normal  normal  0.437739 
 
 
-
 
NC_008785  BMASAVP1_A0010  phenylacetate-CoA oxygenase, PaaI subunit  42.69 
 
 
267 aa  194  1e-48  Burkholderia mallei SAVP1  Bacteria  hitchhiker  0.000231291  n/a   
 
 
-
 
NC_009080  BMA10247_3535  phenylacetic acid degradation protein PaaC  42.69 
 
 
267 aa  194  1e-48  Burkholderia mallei NCTC 10247  Bacteria  normal  0.145535  n/a   
 
 
-
 
NC_008785  BMASAVP1_A3113  phenylacetic acid degradation protein PaaC  42.69 
 
 
267 aa  194  1e-48  Burkholderia mallei SAVP1  Bacteria  hitchhiker  0.0000113004  n/a   
 
 
-
 
NC_009074  BURPS668_3777  phenylacetate-CoA oxygenase, PaaI subunit  42.69 
 
 
267 aa  194  1e-48  Burkholderia pseudomallei 668  Bacteria  hitchhiker  0.000710121  n/a   
 
 
-
 
NC_008836  BMA10229_A1982  phenylacetic acid degradation protein PaaC  42.69 
 
 
267 aa  194  1e-48  Burkholderia mallei NCTC 10229  Bacteria  normal  0.0434051  n/a   
 
 
-
 
NC_002947  PP_3276  phenylacetate-CoA oxygenase, PaaI subunit  42.91 
 
 
252 aa  192  3e-48  Pseudomonas putida KT2440  Bacteria  normal  0.286048  normal 
 
 
-
 
NC_009956  Dshi_3820  phenylacetate-CoA oxygenase, PaaI subunit  40.49 
 
 
255 aa  190  2e-47  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.0961351  normal  0.397039 
 
 
-
 
NC_013093  Amir_6690  phenylacetate-CoA oxygenase, PaaI subunit  41.8 
 
 
317 aa  189  2e-47  Actinosynnema mirum DSM 43827  Bacteria  normal  0.271668  n/a   
 
 
-
 
NC_009512  Pput_2483  phenylacetate-CoA oxygenase, PaaI subunit  42.11 
 
 
252 aa  189  2.9999999999999997e-47  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_2962  phenylacetate-CoA oxygenase, PaaI subunit  46.61 
 
 
309 aa  186  4e-46  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_012803  Mlut_20170  phenylacetate-CoA oxygenase, PaaI subunit  43.15 
 
 
277 aa  183  2.0000000000000003e-45  Micrococcus luteus NCTC 2665  Bacteria  normal  0.826796  n/a   
 
 
-
 
NC_011662  Tmz1t_1504  phenylacetate-CoA oxygenase, PaaI subunit  41.41 
 
 
260 aa  181  8.000000000000001e-45  Thauera sp. MZ1T  Bacteria  normal  0.762155  n/a   
 
 
-
 
NC_013235  Namu_2489  phenylacetate-CoA oxygenase, PaaI subunit  44.35 
 
 
267 aa  181  9.000000000000001e-45  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00000997408  normal  0.0169858 
 
 
-
 
NC_010678  Rpic_4565  phenylacetate-CoA oxygenase, PaaI subunit  40.38 
 
 
266 aa  181  1e-44  Ralstonia pickettii 12J  Bacteria  normal  0.379534  normal  0.482793 
 
 
-
 
NC_013739  Cwoe_2200  phenylacetate-CoA oxygenase, PaaI subunit  41.6 
 
 
249 aa  181  1e-44  Conexibacter woesei DSM 14684  Bacteria  normal  0.339354  normal 
 
 
-
 
NC_012857  Rpic12D_3493  phenylacetate-CoA oxygenase, PaaI subunit  40.38 
 
 
266 aa  181  1e-44  Ralstonia pickettii 12D  Bacteria  normal  normal  0.236613 
 
 
-
 
NC_009654  Mmwyl1_3093  phenylacetate-CoA oxygenase, PaaI subunit  39.52 
 
 
253 aa  176  4e-43  Marinomonas sp. MWYL1  Bacteria  normal  0.15351  hitchhiker  0.000910737 
 
 
-
 
NC_013159  Svir_26510  phenylacetate-CoA oxygenase, PaaI subunit  38.89 
 
 
301 aa  175  8e-43  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.199467  normal  0.1627 
 
 
-
 
NC_010002  Daci_0812  phenylacetate-CoA oxygenase, PaaI subunit  42.45 
 
 
260 aa  173  2.9999999999999996e-42  Delftia acidovorans SPH-1  Bacteria  normal  0.675402  normal 
 
 
-
 
NC_007802  Jann_0653  phenylacetate-CoA oxygenase, PaaI subunit  41.22 
 
 
252 aa  172  5.999999999999999e-42  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_1240  phenylacetate-CoA oxygenase PaaI subunit  43.8 
 
 
233 aa  169  5e-41  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_003296  RSp0606  phenylacetic acid degradation protein  39.02 
 
 
268 aa  168  9e-41  Ralstonia solanacearum GMI1000  Bacteria  normal  0.746613  normal 
 
 
-
 
NC_013169  Ksed_09310  phenylacetate-CoA oxygenase, PaaI subunit  39.13 
 
 
313 aa  167  1e-40  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_3572  phenylacetate-CoA oxygenase, PaaI subunit  38 
 
 
263 aa  167  2e-40  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.289155 
 
 
-
 
NC_008043  TM1040_3726  phenylacetate-CoA oxygenase, PaaI subunit  39.6 
 
 
253 aa  166  2.9999999999999998e-40  Ruegeria sp. TM1040  Bacteria  normal  normal  0.790038 
 
 
-
 
NC_008025  Dgeo_1916  phenylacetate-CoA oxygenase, PaaI subunit  39.53 
 
 
268 aa  161  1e-38  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.938903  normal  0.135103 
 
 
-
 
NC_014212  Mesil_3043  phenylacetate-CoA oxygenase, PaaI subunit  40 
 
 
252 aa  158  6e-38  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_1905  phenylacetate-CoA oxygenase, PaaI subunit  36.78 
 
 
303 aa  151  8.999999999999999e-36  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_2412  phenylacetate-CoA oxygenase PaaI  36.59 
 
 
252 aa  145  5e-34  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_2479  phenylacetate-CoA oxygenase, PaaI subunit  35.2 
 
 
292 aa  126  3e-28  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_0789  phenylacetate-CoA oxygenase, PaaI subunit  32.52 
 
 
251 aa  125  5e-28  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.140444 
 
 
-
 
NC_013743  Htur_2886  phenylacetate-CoA oxygenase, PaaI subunit  32.5 
 
 
290 aa  105  6e-22  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_013922  Nmag_1025  phenylacetate-CoA oxygenase, PaaI subunit  29.62 
 
 
310 aa  99  6e-20  Natrialba magadii ATCC 43099  Archaea  normal  0.650754  n/a   
 
 
-
 
NC_013411  GYMC61_2867  phenylacetate-CoA oxygenase, PaaI subunit  30.97 
 
 
277 aa  94  2e-18  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013205  Aaci_0809  phenylacetate-CoA oxygenase, PaaI subunit  28.5 
 
 
262 aa  80.5  0.00000000000002  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.690009  n/a   
 
 
-
 
NC_013411  GYMC61_2830  phenylacetic acid catabolism protein  24.38 
 
 
214 aa  50.1  0.00004  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013159  Svir_26530  phenylacetate-CoA oxygenase subunit PaaA  24.32 
 
 
309 aa  48.5  0.00009  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.185661  normal  0.154279 
 
 
-
 
NC_013744  Htur_4171  phenylacetic acid catabolic family protein  35.53 
 
 
255 aa  47  0.0003  Haloterrigena turkmenica DSM 5511  Archaea  normal  0.564404  n/a   
 
 
-
 
NC_008709  Ping_0650  phenylacetate-CoA oxygenase subunit PaaA  24.84 
 
 
309 aa  43.5  0.003  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_013744  Htur_4174  phenylacetic acid catabolic family protein  25 
 
 
306 aa  43.1  0.004  Haloterrigena turkmenica DSM 5511  Archaea  normal  0.571745  n/a   
 
 
-
 
NC_010506  Swoo_0221  phenylacetate-CoA oxygenase subunit PaaA  22.94 
 
 
317 aa  42.7  0.005  Shewanella woodyi ATCC 51908  Bacteria  normal  normal  0.0165647 
 
 
-
 
NC_013093  Amir_6692  phenylacetate-CoA oxygenase subunit PaaA  23.01 
 
 
311 aa  42.7  0.006  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_1752  phenylacetic acid catabolic  36.21 
 
 
276 aa  42.4  0.007  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.114115  n/a   
 
 
-
 
NC_013757  Gobs_1907  phenylacetate-CoA oxygenase, PaaG subunit  22.57 
 
 
317 aa  42.4  0.008  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.693657  n/a   
 
 
-
 
NC_012803  Mlut_20150  phenylacetate-CoA oxygenase subunit PaaA  23.12 
 
 
335 aa  42  0.008  Micrococcus luteus NCTC 2665  Bacteria  normal  n/a   
 
 
-
 
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