| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_0755 |
|---|
| Symbol | |
|---|
| ID | 5197789 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | + |
|---|
| Start bp | 835631 |
|---|
| End bp | 836383 |
|---|
| Gene Length | 753 bp |
|---|
| Protein Length | 250 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640580299 |
|---|
| Product | phenylacetate-CoA oxygenase, PaaI subunit |
|---|
| Protein accession | YP_001261260 |
|---|
| Protein GI | 148553678 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3396] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR02158] phenylacetate-CoA oxygenase, PaaI subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.484402 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.296547 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGACA TTCTCTTCCG CAGCCTGCTC GAACTGGGCG ACGACAGCCT GATCCTGGCG
CAGCGCCTCT GCGAGTGGTG CGGCCAGGCG CCGAGCGTCG AGGTCGACCT CAGCCTGTCG
AACCTGGGCC TCGACCTGAT GGGCCAGGCG ACCTTGTTCC TCGGCTATGC CGGGGAAGTC
GAGGGCAAGG GCCGCGACGC CGACCGCCTC GCCTTCCACC GCGACGCCGA GCAGTTCCGC
AACTGCCTGC TGGTCGAGCA GCCGAACGGC GACTTCGGCC AGACCATGGC GCGCCAGTTC
CTGTTCTCGA CCTATCAGCT CGCCTTGTTC GAGGGGCTGG TCGGATCGAC CGACCCGCGC
ATCGCCGAGA TCGCCGCCAA GGCGGTCAAG GAAGTGCGCT ACCATGCCGA CATCTCGGCC
GACTGGGTGA TCCGCCTGGG CGACGGGACC GAGGAGAGCC ACCAGCGCAT GGTCGACGGC
TTCGACTGGT TCTGGCGCTT CATCGACGAC ATGTTCGCGG TGGACGCTGA CCAGCGCGCG
CTGATCGACC AGGGCGTGCT CGTCGACCGG GCGGCGCTCC GCCCGGCGTT CGACGCGCGC
GTCGCCGAGG TGCTGGCCGA GGCCACCCTG CCCGCCGCGG AGCCGGTCTG GCAGGTCGGC
GCGGGCCGCG AGGGCCGGCA CACCGAGCAT CTGTCGCACC TGCTGGGCGT GATGCAGCAG
CTCCCGCGCG CCCACCCGGA AGCCGCCTGG TAA
|
|---|
| Protein sequence | MSDILFRSLL ELGDDSLILA QRLCEWCGQA PSVEVDLSLS NLGLDLMGQA TLFLGYAGEV
EGKGRDADRL AFHRDAEQFR NCLLVEQPNG DFGQTMARQF LFSTYQLALF EGLVGSTDPR
IAEIAAKAVK EVRYHADISA DWVIRLGDGT EESHQRMVDG FDWFWRFIDD MFAVDADQRA
LIDQGVLVDR AALRPAFDAR VAEVLAEATL PAAEPVWQVG AGREGRHTEH LSHLLGVMQQ
LPRAHPEAAW
|
|---|
| |