Gene Daci_0812 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0812 
Symbol 
ID5746366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp905737 
End bp906519 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content72% 
IMG OID641295892 
Productphenylacetate-CoA oxygenase, PaaI subunit 
Protein accessionYP_001561843 
Protein GI160896261 
COG category[S] Function unknown 
COG ID[COG3396] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02158] phenylacetate-CoA oxygenase, PaaI subunit 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.675402 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCCT CCGCCTCCTC CATCGCCATC GACGCCCGGC CCGACGTGCA GTACCTGCTG 
CGCCTGGGCG ATACCTGCCT GATCCTGGCC CAGCGCCTGG GCCAGTGGTG CGGCCACGCG
CCCATCCTCG AAGAGGACAT CGCCATGACC AACATGGCGT TGGACCTGGT CGGCCAGGCG
CGTGCGCTGC TCACCCGCGC CGGCCAGCTC GAAGGCCGCG CGCACGACGA GGACCAGCTC
GCCTTTCTGC GCGACGAGCG CGACTACTTC AACGCCACGC TGGCCGAGCT GCCGCGCGGC
GACTTCGCCT TCACCGTGCT GCGCAACGCC ATGGCCGCCA CCTGGCTGCG CCTGATGTGG
GAGCGCCTGG TGCAATCCAG CGATGCCGAG CTGGCCGCCA TCGCCGCCAA GGCGCTCAAG
GAGGCGCGCT ACCACGAGCA GCACGCGGGC GACTGGGTGG TGCGCCTGGG CGACGGCACC
GAGGAATCGC GCCAGCGCAT GGAGGCGGCG CTGGGCCAGC TGTGGCGCTA TGCGGCCGAG
CTGTTCACCG ACGACGCCAC AGACGCCGCC GCGCGCGCCA GCGGCCTGGG CCCGGCCTGG
TCCGAGCTGC GCGAGCCCTG GCAGGCCGAA ATGGCCGCCC TGCTGCAGGA GGCCACGCTG
GACATGCCGG CCGAATCCGC CTTCCGCAGC ACGGGCCGCA ACGGCGTGCA CAGCGAGCAC
ATGGGCTTCA TCCTGGCCGA GATGCAGCAC CTGCAGCGCG CCTATCCGGG CGGGGTGTGG
TGA
 
Protein sequence
MNASASSIAI DARPDVQYLL RLGDTCLILA QRLGQWCGHA PILEEDIAMT NMALDLVGQA 
RALLTRAGQL EGRAHDEDQL AFLRDERDYF NATLAELPRG DFAFTVLRNA MAATWLRLMW
ERLVQSSDAE LAAIAAKALK EARYHEQHAG DWVVRLGDGT EESRQRMEAA LGQLWRYAAE
LFTDDATDAA ARASGLGPAW SELREPWQAE MAALLQEATL DMPAESAFRS TGRNGVHSEH
MGFILAEMQH LQRAYPGGVW