| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_1233 |
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| Symbol | |
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| ID | 7973157 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 1347699 |
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| End bp | 1348478 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644791830 |
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| Product | phenylacetate-CoA oxygenase, PaaI subunit |
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| Protein accession | YP_002943150 |
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| Protein GI | 239814240 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3396] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR02158] phenylacetate-CoA oxygenase, PaaI subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.829898 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGCAT CCATAGAACT GAACCGCACC CCCGCCGTGC AATACCTGCT GCGCATAGGC
GACACCTGCC TCGTGCTCGC GCAGCGCCTC GGCGAATGGT GCGGCCATGC GCCCGTGCTG
GAAGAAGACA TCGCGATGGC CAACATCGCG CTCGACCTCG TCGGCCAGGC CCGCGCACTG
CTCACGCACG CCGGCAAGCT CGAAGGCGAA GGCCGCGAAC ATGACGAAGA CCAGCTCGCC
TACCTGCGCG ACGAGCGCGA CTACTTCAAC CTCACGCTGG TCGAGCTGCC GCGCGGCGAC
TTTGCCTTTG CCGTGGTGCG TAACACCATG GTCGCCACGC TGCTCAAGCT GCTGTGGCAA
CGCCTTGCCG CATCGAGCGA TGCCGAAGTG GCCGCCATCG CCGGCAAGGC CGTGAAGGAA
GCGCGCTACC ACCAGCAGCA TTCCGGCGAC TGGGTCGTGC GGCTCGGCGA CGGCACCGAC
GAATCGCGCC GCCGCACGGA AAAGGCGCTG AAGCAGCTCT GGCTCTACAT GCCCGAGCTG
TTCGAGAGCG ATGCGGTCGA TGCGCAAGCC AGCGCAAGCG GCCTCGGCCC CGCATGGAGC
GAACTGCACG AGCCGTGGCT TGCCGAGATG CAGCAGGTGC TCGACGCCGC CGGGCTCGCC
ATGCCGCAGG AGACTGCCTT CCGCAGCACC GGCAAGCAGG GCGTGCACAG CGAGCACATG
GGCTACATCC TGGCCGAGAT GCAGCACCTG CAGCGCAGCT ATCCCGGAGG CGTGTGGTGA
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| Protein sequence | MQASIELNRT PAVQYLLRIG DTCLVLAQRL GEWCGHAPVL EEDIAMANIA LDLVGQARAL
LTHAGKLEGE GREHDEDQLA YLRDERDYFN LTLVELPRGD FAFAVVRNTM VATLLKLLWQ
RLAASSDAEV AAIAGKAVKE ARYHQQHSGD WVVRLGDGTD ESRRRTEKAL KQLWLYMPEL
FESDAVDAQA SASGLGPAWS ELHEPWLAEM QQVLDAAGLA MPQETAFRST GKQGVHSEHM
GYILAEMQHL QRSYPGGVW
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