Gene Smed_4149 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_4149 
Symbol 
ID5319145 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009620 
Strand
Start bp621541 
End bp622326 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content63% 
IMG OID640775954 
Productphenylacetate-CoA oxygenase, PaaI subunit 
Protein accessionYP_001312887 
Protein GI150376291 
COG category[S] Function unknown 
COG ID[COG3396] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02158] phenylacetate-CoA oxygenase, PaaI subunit 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.775902 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCAGA CGATTGCGAT AGAGGCGGCC GTCGAACGGT CCGCGCTGTT CGAGTTTCTT 
CTCGGCATGG GCGACAATAC GCTCGTTCTC GGCCATCGCC TTTCCGAATG GTGCGGCCAT
TCCCCGGCAC TCGAGGAGGA CATCGCGCTC GCCAATACGG CGCTCGACCT CATCGGCCAG
ACGCAGCTCT GGCTTGGCCT CGCAGGCGAG GTCGAGGGCA AGGGCCGCAA TGCGGACGAT
CTTGCCTTTC TCCGGGATGT GCGCGAATTC CGTAACCTTC TGCTTGCGGA GCGGCCGAAC
GGGGATTACG GCAGGACCCT GATGCGCCAG TTCCTGTTCG ACGCATGGCA CTATCTTGCG
CTGAAAGGCC TTCGCGCTTC CTCCGATCCC CGCATTGCCG CGATCGCCGA GAAAACCTCG
AAGGAGGTGG CCTATCACCT CGAACGCAGC CGTGATCTCG TGATCCGCCT TGGCGACGGC
ACGGCGGAAA GCCATGCCCG GATGAAAAAG GCGCTGGACG AGCTCTGGTC CTATACCGGT
GAGATGTTCG TGAACGAGGC GCACGACGCG GCCCTTGCGG CTGCCGGCTT GGCACCGGAG
CCGGAAAGCC TAGAGGCCGA ATGGAATACG CTCGTCGCAG AAACACTCTG CGCGGCTACG
CTCGGAAAAC CGCAGGGCGG CTATATGCAC AGGGGCGGAA AGCGCGGCCT CCATACGGAG
CACCTCGGCT ATGTGCTCGC CGAGATGCAG TTCCTGCAGC GCGCCTATCC GGGTGCCAGC
TGGTAG
 
Protein sequence
MAQTIAIEAA VERSALFEFL LGMGDNTLVL GHRLSEWCGH SPALEEDIAL ANTALDLIGQ 
TQLWLGLAGE VEGKGRNADD LAFLRDVREF RNLLLAERPN GDYGRTLMRQ FLFDAWHYLA
LKGLRASSDP RIAAIAEKTS KEVAYHLERS RDLVIRLGDG TAESHARMKK ALDELWSYTG
EMFVNEAHDA ALAAAGLAPE PESLEAEWNT LVAETLCAAT LGKPQGGYMH RGGKRGLHTE
HLGYVLAEMQ FLQRAYPGAS W