| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMASAVP1_A3113 |
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| Symbol | paaC |
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| ID | 4680347 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia mallei SAVP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008785 |
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| Strand | + |
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| Start bp | 3086109 |
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| End bp | 3086912 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639847370 |
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| Product | phenylacetic acid degradation protein PaaC |
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| Protein accession | YP_994401 |
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| Protein GI | 121599300 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3396] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR02158] phenylacetate-CoA oxygenase, PaaI subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0000113004 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGACGA CCCCACAACA TCTCGCGTAC GTGCTGCGCC TCGCCGACAA CGCGCTGATC
CTCGGCCAGC GCAACGCCGA ATGGTGCGGG CATGGCCCGG TGCTCGAGGA AGACATCGCG
CTCACGAACA TGAGCCTCGA TCTGATCGGC CAGGCGCGCC TGCTGTATAC GCACGCGGCC
GAGCTCGAGC GGCAGCTCAC CGGCGCCGCG CGGACCGAGG ACGACTACGC GTACTTCCGC
GCCGAACGCG AATTCGCGAA TTACACGTTC GTCGAGCTGC CGCACTACGG CCCGCTCTGC
GGCACCGCGC ACGCGGAGCT CGACTATGCG GTGACCGTCG TGCGCAACTT CCTCTATTCG
ACGCTGATGC TGCACCTATG GACCGCGCTC GAGGCGTCGG GCGATGCGCA ACTCGCGGCG
ATCGCGGCGA AATCGGTGAA GGAGACGCGC TATCACGAGC ACCACGCGCG TGAATGGCTG
ATCCGCTTCG GCGACGGCAC CGATGAATCG CACCGCCGCG CGCAGGCCGC GCTCGACCAT
TTGATGCCGT ATACGCGCGA ATTCTTCGCG ACGGACGCGA TAGACGACGC GGCAGCGGCG
GCCGGCATCG GCCCGGCGAT CGCGTCGATC GAGCCGGCGT GGCGTGCCGA CATCGAAGCC
GCGCTCGCCG AGGCGACGCT CGCGCTGCCC ACCGCCGGCC AGTACGTACC AACCGGCAAG
CGCGGCGAGC ATTCGGAACA TATGGGCTAT CTGCTCGCCG AGCTGCAGAG CATCGCGCGC
CAGCACCCGG GCGCGACCTG GTAA
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| Protein sequence | MTTTPQHLAY VLRLADNALI LGQRNAEWCG HGPVLEEDIA LTNMSLDLIG QARLLYTHAA
ELERQLTGAA RTEDDYAYFR AEREFANYTF VELPHYGPLC GTAHAELDYA VTVVRNFLYS
TLMLHLWTAL EASGDAQLAA IAAKSVKETR YHEHHAREWL IRFGDGTDES HRRAQAALDH
LMPYTREFFA TDAIDDAAAA AGIGPAIASI EPAWRADIEA ALAEATLALP TAGQYVPTGK
RGEHSEHMGY LLAELQSIAR QHPGATW
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