88 homologs were found in PanDaTox collection
for query gene Pden_4808 on replicon NC_008688
Organism: Paracoccus denitrificans PD1222



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008688  Pden_4808  phenylacetate-CoA oxygenase, PaaI subunit  100 
 
 		 270 aa  546  1e-154  Paracoccus denitrificans PD1222  Bacteria  normal  0.364827  normal  0.548866 
 
 
-
 
NC_007964  Nham_0930  phenylacetate-CoA oxygenase, PaaI subunit  74.2 
 
 		 283 aa  432  1e-120  Nitrobacter hamburgensis X14  Bacteria  normal  1  n/a   
 
 
-
 
NC_011894  Mnod_3354  phenylacetate-CoA oxygenase, PaaI subunit  68.07 
 
 		 284 aa  397  9.999999999999999e-111  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.314155  n/a   
 
 
-
 
NC_009620  Smed_4149  phenylacetate-CoA oxygenase, PaaI subunit  72.29 
 
 		 261 aa  363  2e-99  Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  0.775902 
 
 
-
 
NC_009956  Dshi_3820  phenylacetate-CoA oxygenase, PaaI subunit  68.67 
 
 		 255 aa  350  1e-95  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.0961351  normal  0.397039 
 
 
-
 
NC_007348  Reut_B3737  phenylacetate-CoA oxygenase, PaaI subunit  66.53 
 
 		 250 aa  333  2e-90  Ralstonia eutropha JMP134  Bacteria  normal  0.223474  n/a   
 
 
-
 
NC_008043  TM1040_3726  phenylacetate-CoA oxygenase, PaaI subunit  68.95 
 
 		 253 aa  329  3e-89  Ruegeria sp. TM1040  Bacteria  normal  1  normal  0.790038 
 
 
-
 
NC_007802  Jann_0653  phenylacetate-CoA oxygenase, PaaI subunit  63.24 
 
 		 252 aa  302  4.0000000000000003e-81  Jannaschia sp. CCS1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007925  RPC_0689  phenylacetate-CoA oxygenase, PaaI subunit  58.09 
 
 		 258 aa  286  2.9999999999999996e-76  Rhodopseudomonas palustris BisB18  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007778  RPB_3639  phenylacetate-CoA oxygenase, PaaI subunit  54.07 
 
 		 258 aa  284  1.0000000000000001e-75  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  0.330686 
 
 
-
 
NC_013501  Rmar_1545  phenylacetate-CoA oxygenase, PaaI subunit  58.87 
 
 		 260 aa  280  3e-74  Rhodothermus marinus DSM 4252  Bacteria  normal  1  n/a   
 
 
-
 
NC_009485  BBta_2867  phenylacetic acid degradation protein paaC  50.38 
 
 		 258 aa  270  2.9999999999999997e-71  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.212868  normal  0.316669 
 
 
-
 
NC_007958  RPD_1826  phenylacetate-CoA oxygenase, PaaI subunit  52.85 
 
 		 258 aa  269  2.9999999999999997e-71  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.0299219  normal  1 
 
 
-
 
NC_011004  Rpal_4287  phenylacetate-CoA oxygenase, PaaI subunit  52.44 
 
 		 258 aa  270  2.9999999999999997e-71  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.129716  n/a   
 
 
-
 
NC_009720  Xaut_0898  phenylacetate-CoA oxygenase, PaaI subunit  53.31 
 
 		 258 aa  265  5e-70  Xanthobacter autotrophicus Py2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011894  Mnod_7197  phenylacetate-CoA oxygenase, PaaI subunit  53.66 
 
 		 256 aa  264  1e-69  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_010322  PputGB1_2620  phenylacetate-CoA oxygenase, PaaI subunit  52.4 
 
 		 252 aa  256  2e-67  Pseudomonas putida GB-1  Bacteria  normal  1  normal  0.437739 
 
 
-
 
NC_010501  PputW619_2633  phenylacetate-CoA oxygenase, PaaI subunit  52.21 
 
 		 252 aa  256  2e-67  Pseudomonas putida W619  Bacteria  normal  0.301117  normal  0.0854838 
 
 
-
 
NC_002947  PP_3276  phenylacetate-CoA oxygenase, PaaI subunit  52 
 
 		 252 aa  254  1.0000000000000001e-66  Pseudomonas putida KT2440  Bacteria  normal  0.286048  normal  1 
 
 
-
 
NC_009511  Swit_0755  phenylacetate-CoA oxygenase, PaaI subunit  50.81 
 
 		 250 aa  252  5.000000000000001e-66  Sphingomonas wittichii RW1  Bacteria  normal  0.484402  normal  0.296547 
 
 
-
 
NC_009512  Pput_2483  phenylacetate-CoA oxygenase, PaaI subunit  51.2 
 
 		 252 aa  251  6e-66  Pseudomonas putida F1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008578  Acel_1441  phenylacetate-CoA oxygenase, PaaI subunit  50.81 
 
 		 252 aa  251  8.000000000000001e-66  Acidothermus cellulolyticus 11B  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009484  Acry_2610  phenylacetate-CoA oxygenase, PaaI subunit  54.07 
 
 		 269 aa  249  3e-65  Acidiphilium cryptum JF-5  Bacteria  normal  1  n/a   
 
 
-
 
NC_009654  Mmwyl1_3093  phenylacetate-CoA oxygenase, PaaI subunit  51.22 
 
 		 253 aa  249  5e-65  Marinomonas sp. MWYL1  Bacteria  normal  0.15351  hitchhiker  0.000910737 
 
 
-
 
CP001637  EcDH1_2255  phenylacetate-CoA oxygenase, PaaI subunit  49.79 
 
 		 248 aa  244  8e-64  Escherichia coli DH1  Bacteria  normal  0.861974  n/a   
 
 
-
 
NC_009800  EcHS_A1477  phenylacetate-CoA oxygenase, PaaI subunit  49.38 
 
 		 248 aa  243  1.9999999999999999e-63  Escherichia coli HS  Bacteria  normal  1  n/a   
 
 
-
 
NC_010468  EcolC_2265  phenylacetate-CoA oxygenase, PaaI subunit  49.38 
 
 		 248 aa  243  1.9999999999999999e-63  Escherichia coli ATCC 8739  Bacteria  normal  0.689488  normal  1 
 
 
-
 
NC_009380  Strop_4071  phenylacetate-CoA oxygenase, PaaI subunit  49.62 
 
 		 267 aa  243  1.9999999999999999e-63  Salinispora tropica CNB-440  Bacteria  normal  0.421064  normal  0.190535 
 
 
-
 
NC_009801  EcE24377A_1575  phenylacetate-CoA oxygenase, PaaI subunit  49.79 
 
 		 248 aa  243  3e-63  Escherichia coli E24377A  Bacteria  normal  1  n/a   
 
 
-
 
NC_013131  Caci_1746  phenylacetate-CoA oxygenase, PaaI subunit  52.7 
 
 		 256 aa  241  1e-62  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  0.951636 
 
 
-
 
NC_009832  Spro_3074  phenylacetate-CoA oxygenase, PaaI subunit  50.41 
 
 		 253 aa  241  1e-62  Serratia proteamaculans 568  Bacteria  normal  1  normal  0.156796 
 
 
-
 
NC_012791  Vapar_1233  phenylacetate-CoA oxygenase, PaaI subunit  51.42 
 
 		 259 aa  240  2e-62  Variovorax paradoxus S110  Bacteria  normal  0.829898  n/a   
 
 
-
 
NC_009953  Sare_4470  phenylacetate-CoA oxygenase, PaaI subunit  50.41 
 
 		 253 aa  239  2.9999999999999997e-62  Salinispora arenicola CNS-205  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008699  Noca_3157  phenylacetate-CoA oxygenase, PaaI subunit  50.2 
 
 		 247 aa  238  5.999999999999999e-62  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_014230  CA2559_05320  Phenylacetate-CoA oxygenase, PaaI subunit  42.97 
 
 		 251 aa  238  1e-61  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.575259  n/a   
 
 
-
 
NC_008786  Veis_3947  phenylacetate-CoA oxygenase, PaaI subunit  47.76 
 
 		 258 aa  233  4.0000000000000004e-60  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.88088  normal  0.372125 
 
 
-
 
NC_008709  Ping_0652  phenylacetate-CoA oxygenase, PaaI subunit  42.45 
 
 		 252 aa  232  6e-60  Psychromonas ingrahamii 37  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013739  Cwoe_2200  phenylacetate-CoA oxygenase, PaaI subunit  50.21 
 
 		 249 aa  231  8.000000000000001e-60  Conexibacter woesei DSM 14684  Bacteria  normal  0.339354  normal  1 
 
 
-
 
NC_007973  Rmet_3371  phenylacetate-CoA oxygenase PaaI  48.35 
 
 		 285 aa  228  8e-59  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008825  Mpe_A0989  putative ring-hydroxylation complex protein 2  48.36 
 
 		 257 aa  228  1e-58  Methylibium petroleiphilum PM1  Bacteria  normal  0.142392  normal  1 
 
 
-
 
NC_007347  Reut_A3208  phenylacetate-CoA oxygenase, PaaI subunit  46.07 
 
 		 280 aa  227  2e-58  Ralstonia eutropha JMP134  Bacteria  normal  1  n/a   
 
 
-
 
NC_013235  Namu_2489  phenylacetate-CoA oxygenase, PaaI subunit  51.59 
 
 		 267 aa  226  3e-58  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00000997408  normal  0.0169858 
 
 
-
 
NC_010508  Bcenmc03_0308  phenylacetate-CoA oxygenase, PaaI subunit  45.91 
 
 		 267 aa  221  9.999999999999999e-57  Burkholderia cenocepacia MC0-3  Bacteria  hitchhiker  0.000247438  hitchhiker  0.00132026 
 
 
-
 
NC_007298  Daro_0379  phenylacetate-CoA oxygenase, PaaI subunit  46.9 
 
 		 260 aa  220  1.9999999999999999e-56  Dechloromonas aromatica RCB  Bacteria  normal  0.0229824  hitchhiker  0.00128287 
 
 
-
 
NC_013159  Svir_26510  phenylacetate-CoA oxygenase, PaaI subunit  44.08 
 
 		 301 aa  218  6e-56  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.199467  normal  0.1627 
 
 
-
 
NC_008060  Bcen_2778  phenylacetate-CoA oxygenase, PaaI subunit  45.53 
 
 		 267 aa  218  6e-56  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.0393983  n/a   
 
 
-
 
NC_008542  Bcen2424_0328  phenylacetate-CoA oxygenase, PaaI subunit  45.53 
 
 		 267 aa  218  6e-56  Burkholderia cenocepacia HI2424  Bacteria  normal  0.0719098  n/a   
 
 
-
 
NC_008541  Arth_3216  phenylacetate-CoA oxygenase, PaaI subunit  49.59 
 
 		 288 aa  217  2e-55  Arthrobacter sp. FB24  Bacteria  normal  0.105591  n/a   
 
 
-
 
NC_010681  Bphyt_3664  phenylacetate-CoA oxygenase, PaaI subunit  43.46 
 
 		 267 aa  216  2e-55  Burkholderia phytofirmans PsJN  Bacteria  normal  0.19966  hitchhiker  0.000000312468 
 
 
-
 
NC_010622  Bphy_2859  phenylacetate-CoA oxygenase, PaaI subunit  44.36 
 
 		 267 aa  215  5.9999999999999996e-55  Burkholderia phymatum STM815  Bacteria  normal  1  hitchhiker  0.00441698 
 
 
-
 
NC_010002  Daci_0812  phenylacetate-CoA oxygenase, PaaI subunit  46.42 
 
 		 260 aa  211  7.999999999999999e-54  Delftia acidovorans SPH-1  Bacteria  normal  0.675402  normal  1 
 
 
-
 
NC_010084  Bmul_0230  phenylacetate-CoA oxygenase, PaaI subunit  45.91 
 
 		 267 aa  211  9e-54  Burkholderia multivorans ATCC 17616  Bacteria  hitchhiker  0.000135913  hitchhiker  0.00143113 
 
 
-
 
NC_010524  Lcho_3572  phenylacetate-CoA oxygenase, PaaI subunit  47.41 
 
 		 263 aa  211  1e-53  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.289155 
 
 
-
 
NC_010551  BamMC406_0256  phenylacetate-CoA oxygenase, PaaI subunit  47.08 
 
 		 267 aa  210  2e-53  Burkholderia ambifaria MC40-6  Bacteria  hitchhiker  0.00364013  normal  0.0307686 
 
 
-
 
NC_007951  Bxe_A0293  phenylacetic acid degradation protein PaaC  43.08 
 
 		 267 aa  210  2e-53  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012803  Mlut_20170  phenylacetate-CoA oxygenase, PaaI subunit  47.3 
 
 		 277 aa  209  3e-53  Micrococcus luteus NCTC 2665  Bacteria  normal  0.826796  n/a   
 
 
-
 
NC_010678  Rpic_4565  phenylacetate-CoA oxygenase, PaaI subunit  46.01 
 
 		 266 aa  208  8e-53  Ralstonia pickettii 12J  Bacteria  normal  0.379534  normal  0.482793 
 
 
-
 
NC_012857  Rpic12D_3493  phenylacetate-CoA oxygenase, PaaI subunit  46.01 
 
 		 266 aa  208  8e-53  Ralstonia pickettii 12D  Bacteria  normal  1  normal  0.236613 
 
 
-
 
NC_013093  Amir_6690  phenylacetate-CoA oxygenase, PaaI subunit  46.4 
 
 		 317 aa  207  2e-52  Actinosynnema mirum DSM 43827  Bacteria  normal  0.271668  n/a   
 
 
-
 
NC_007510  Bcep18194_A3427  phenylacetate-CoA oxygenase, PaaI subunit  46.3 
 
 		 267 aa  202  4e-51  Burkholderia sp. 383  Bacteria  hitchhiker  0.0000694347  normal  0.842688 
 
 
-
 
NC_003296  RSp0606  phenylacetic acid degradation protein  47.73 
 
 		 268 aa  202  7e-51  Ralstonia solanacearum GMI1000  Bacteria  normal  0.746613  normal  1 
 
 
-
 
NC_011886  Achl_2962  phenylacetate-CoA oxygenase, PaaI subunit  46.92 
 
 		 309 aa  201  8e-51  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  1 
 
 
-
 
NC_011662  Tmz1t_1504  phenylacetate-CoA oxygenase, PaaI subunit  44.92 
 
 		 260 aa  197  1.0000000000000001e-49  Thauera sp. MZ1T  Bacteria  normal  0.762155  n/a   
 
 
-
 
NC_010506  Swoo_0219  phenylacetate-CoA oxygenase, PaaI subunit  44.35 
 
 		 248 aa  197  2.0000000000000003e-49  Shewanella woodyi ATCC 51908  Bacteria  normal  1  normal  0.0174544 
 
 
-
 
NC_007651  BTH_I3099  phenylacetate-CoA oxygenase, PaaI subunit  42.8 
 
 		 267 aa  196  3e-49  Burkholderia thailandensis E264  Bacteria  normal  0.0237514  n/a   
 
 
-
 
NC_008390  Bamb_0247  phenylacetate-CoA oxygenase, PaaI subunit  46.69 
 
 		 267 aa  195  8.000000000000001e-49  Burkholderia ambifaria AMMD  Bacteria  normal  0.185899  n/a   
 
 
-
 
NC_008025  Dgeo_1916  phenylacetate-CoA oxygenase, PaaI subunit  45.12 
 
 		 268 aa  188  9e-47  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.938903  normal  0.135103 
 
 
-
 
NC_013947  Snas_1240  phenylacetate-CoA oxygenase PaaI subunit  45.75 
 
 		 233 aa  187  2e-46  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014212  Mesil_3043  phenylacetate-CoA oxygenase, PaaI subunit  41.94 
 
 		 252 aa  184  2.0000000000000003e-45  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008836  BMA10229_A1982  phenylacetic acid degradation protein PaaC  44.75 
 
 		 267 aa  182  7e-45  Burkholderia mallei NCTC 10229  Bacteria  normal  0.0434051  n/a   
 
 
-
 
NC_008785  BMASAVP1_A0010  phenylacetate-CoA oxygenase, PaaI subunit  44.75 
 
 		 267 aa  182  7e-45  Burkholderia mallei SAVP1  Bacteria  hitchhiker  0.000231291  n/a   
 
 
-
 
NC_008785  BMASAVP1_A3113  phenylacetic acid degradation protein PaaC  44.75 
 
 		 267 aa  182  7e-45  Burkholderia mallei SAVP1  Bacteria  hitchhiker  0.0000113004  n/a   
 
 
-
 
NC_009080  BMA10247_3535  phenylacetic acid degradation protein PaaC  44.75 
 
 		 267 aa  182  7e-45  Burkholderia mallei NCTC 10247  Bacteria  normal  0.145535  n/a   
 
 
-
 
NC_006348  BMA2575  phenylacetic acid degradation protein PaaC  44.75 
 
 		 267 aa  182  7e-45  Burkholderia mallei ATCC 23344  Bacteria  normal  0.164193  n/a   
 
 
-
 
NC_007434  BURPS1710b_0009  phenylacetate-CoA oxygenase, PaaI subunit  44.75 
 
 		 267 aa  181  8.000000000000001e-45  Burkholderia pseudomallei 1710b  Bacteria  normal  0.235905  n/a   
 
 
-
 
NC_009074  BURPS668_3777  phenylacetate-CoA oxygenase, PaaI subunit  44.75 
 
 		 267 aa  181  8.000000000000001e-45  Burkholderia pseudomallei 668  Bacteria  hitchhiker  0.000710121  n/a   
 
 
-
 
NC_009076  BURPS1106A_3838  phenylacetate-CoA oxygenase, PaaI subunit  44.75 
 
 		 267 aa  181  2e-44  Burkholderia pseudomallei 1106a  Bacteria  normal  0.791762  n/a   
 
 
-
 
NC_013169  Ksed_09310  phenylacetate-CoA oxygenase, PaaI subunit  42.63 
 
 		 313 aa  180  2e-44  Kytococcus sedentarius DSM 20547  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013757  Gobs_1905  phenylacetate-CoA oxygenase, PaaI subunit  40.71 
 
 		 303 aa  178  7e-44  Geodermatophilus obscurus DSM 43160  Bacteria  normal  1  n/a   
 
 
-
 
NC_013946  Mrub_2412  phenylacetate-CoA oxygenase PaaI  40.33 
 
 		 252 aa  167  1e-40  Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014210  Ndas_2479  phenylacetate-CoA oxygenase, PaaI subunit  39.58 
 
 		 292 aa  160  2e-38  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013132  Cpin_0789  phenylacetate-CoA oxygenase, PaaI subunit  34.94 
 
 		 251 aa  144  2e-33  Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  0.140444 
 
 
-
 
NC_013743  Htur_2886  phenylacetate-CoA oxygenase, PaaI subunit  37.63 
 
 		 290 aa  112  8.000000000000001e-24  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_013411  GYMC61_2867  phenylacetate-CoA oxygenase, PaaI subunit  32.71 
 
 		 277 aa  109  4.0000000000000004e-23  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013205  Aaci_0809  phenylacetate-CoA oxygenase, PaaI subunit  41.25 
 
 		 262 aa  108  7.000000000000001e-23  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.690009  n/a   
 
 
-
 
NC_013922  Nmag_1025  phenylacetate-CoA oxygenase, PaaI subunit  35.23 
 
 		 310 aa  107  3e-22  Natrialba magadii ATCC 43099  Archaea  normal  0.650754  n/a   
 
 
-
 
NC_013744  Htur_4174  phenylacetic acid catabolic family protein  25 
 
 		 306 aa  58.9  0.00000009  Haloterrigena turkmenica DSM 5511  Archaea  normal  0.571745  n/a   
 
 
-
 
NC_013744  Htur_4171  phenylacetic acid catabolic family protein  29.27 
 
 		 255 aa  56.6  0.0000004  Haloterrigena turkmenica DSM 5511  Archaea  normal  0.564404  n/a   
 
 
-
 
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