Gene Daro_0379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_0379 
Symbol 
ID3569682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp412218 
End bp413000 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content63% 
IMG OID637678821 
Productphenylacetate-CoA oxygenase, PaaI subunit 
Protein accessionYP_283608 
Protein GI71906021 
COG category[S] Function unknown 
COG ID[COG3396] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02158] phenylacetate-CoA oxygenase, PaaI subunit 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value0.0229824 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00128287 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGTGCCG CCATCGATTA CCTGCTGCAT CTGGCTGACA ATGCCCTGGT CCTCGGCCAG 
CGCAATGCCG AATGGTGCGG CCACGGGCCG ATCCTTGAAG AAGACATTGC GCTGTCCAAC
GTCAGCCTCG ACCTGATTGG CCAGGCCCGC ATGCTCTATC AGCTGGTTGC ACAGCTGAAG
GGCGGCGATG CCACCGAAGA CAAGCTGGCC TACTTCCGCG ATACCGGCGA ATTCCGCAAC
TACACGCTGC TCGAACTGCC GCACCATGGC CCGCTGTCCG GCTATGCCCA CAGCAGCCTC
GACTACGGCA CGACCATCGT CCGCAACTTC CTGTACAGCG CCCTGATGGC CCTGCTCTGG
GAAGCGCTGG CCAAGTCGAA CAACGCCGAT CTGGCCGCCA TCGCCGCCAA GTCGCTGAAG
GAAGTACGCT ATCACCTGCG CCACTCCCGC GACTGGCTGG TTCGCCTCGG CGATGGCACC
GAGGAATCGC ATGCCCGCGT TCAGGCCTCA CTCGATCACC TGATGCCCTA CACCCAGGAA
TTCTGGGCCC ACAGCCCGGC CGAAGCCGCC GCGGTGAAGG ATGGTATTGC CGTTGATCTG
AACACGCTGA AGGCCGACTG GGATGGCATC GTCGATGCCG CGCTGGAAGA AGCGACGCTG
CAGCGCCCGA AAGCCGGCGG TTACGTTTCG GACGGCAAGA ACGGCGTGCA TTCCGAGCAT
CTCGGCTTCC TGCTGGCCGA AATGCAAAGC CTGGCCCGCG CCCATCCGAA CGGGGTCTGG
TAA
 
Protein sequence
MSAAIDYLLH LADNALVLGQ RNAEWCGHGP ILEEDIALSN VSLDLIGQAR MLYQLVAQLK 
GGDATEDKLA YFRDTGEFRN YTLLELPHHG PLSGYAHSSL DYGTTIVRNF LYSALMALLW
EALAKSNNAD LAAIAAKSLK EVRYHLRHSR DWLVRLGDGT EESHARVQAS LDHLMPYTQE
FWAHSPAEAA AVKDGIAVDL NTLKADWDGI VDAALEEATL QRPKAGGYVS DGKNGVHSEH
LGFLLAEMQS LARAHPNGVW