| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_A0293 |
|---|
| Symbol | |
|---|
| ID | 4006134 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia xenovorans LB400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007951 |
|---|
| Strand | + |
|---|
| Start bp | 4546087 |
|---|
| End bp | 4546890 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637949353 |
|---|
| Product | phenylacetic acid degradation protein PaaC |
|---|
| Protein accession | YP_560692 |
|---|
| Protein GI | 91785486 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3396] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR02158] phenylacetate-CoA oxygenase, PaaI subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACATCA CGCCTCAACA TCTGCAATAC GTGCTGCGCC TCGCGGATAA CGCGCTGATC
CTCGGTCAGC GCAATACCGA ATGGAGCGGC CACGGTCCGA TCCTAGAAGA GGACATCGCG
CTGTCGAACA TGAGCCTCGA CCTGATCGGC CAGGCGCGTC TGCTCTACAC GCACGCCGCC
TCGCTCGAAC AGCAGCTCAC CGGCAAAATC CGCACGGAAG ACGATTACGC GTATTTTCGC
GCCGAGCGCG AATTCGCCAA CTACACACTC GCCGAGTTGC CGCATGTCGG CCCGCTGTCG
GCCACGGCTA AAGCCGAGAA GGATTACGCG GTCACCATCG TGCGCAATTT TCTCTACTCG
ACGTTGATGG CTCATCTGTG GACGGCCCTC ACGGCGTCCA CCGACGAGCA GCTGGCGGCG
ATCGCGTCGA AGTCGATCAA GGAAACCAGC TATCACGTGC ATCACGCACG CGAGTGGCTG
ATCCGTTTCG GCGACGGCAC CGAGGAATCG CATCGCCGCG CGCAAGCCGC GCTGGACTAT
CTGCTGCCCT ACACCCGCGA ATTCTTCAGC ACGGATGCGG TAGAGGAGAC GATTGCGGCA
GCCGGCATCG GTCCACTGAC CTCGGACCTC GAAACTGCCT GGCTCGACGA CGTGCGCGCC
GCGCTCGACG AAGCCACCTT GAAGCTGCCC GAACCGGTCA GGCACATCAC CACCGGCAAA
CACGGCGAGC ATTCCGAGCA CATGGGTTTC GTGCTGGCCG AAATGCAGAG CCTCGCTCGC
CAGCATCCCG GCGCCACCTG GTAA
|
|---|
| Protein sequence | MNITPQHLQY VLRLADNALI LGQRNTEWSG HGPILEEDIA LSNMSLDLIG QARLLYTHAA
SLEQQLTGKI RTEDDYAYFR AEREFANYTL AELPHVGPLS ATAKAEKDYA VTIVRNFLYS
TLMAHLWTAL TASTDEQLAA IASKSIKETS YHVHHAREWL IRFGDGTEES HRRAQAALDY
LLPYTREFFS TDAVEETIAA AGIGPLTSDL ETAWLDDVRA ALDEATLKLP EPVRHITTGK
HGEHSEHMGF VLAEMQSLAR QHPGATW
|
|---|
| |