| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_0653 |
|---|
| Symbol | |
|---|
| ID | 3933096 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | - |
|---|
| Start bp | 623999 |
|---|
| End bp | 624757 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637903000 |
|---|
| Product | phenylacetate-CoA oxygenase, PaaI subunit |
|---|
| Protein accession | YP_508595 |
|---|
| Protein GI | 89053144 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3396] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR02158] phenylacetate-CoA oxygenase, PaaI subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGATG TGATCCAAGA CCGGGCGGAC AAGGCCCTGT TCGAGTTTCT CCTGCGGATG
GGCGACAACA CCCTGATCCT CGGCCACCGC CTGTCGGAAT GGTGCGGCAA GGGGCCGGTG
CTGGAAGAAG ACATCGCACT GGCCAACACG GCGCTGGATT TCATCGGACA GACCCAGATG
TGGCTTGGCC TGGCCGGAGA GGTGGAGGGC AAAGGCCGCT CCGCCGACGA TCTGGCGATG
CTGCGCGATG CGTGGGATTT CCGCTGTTGC CTGCTGGTGC AACAGCCCAA CGGTCATTTC
GGCCAAACAC TAATGCGGCA ATTTCTGTTT GATAACTGGC ACTTGAGTAT GCTGCTCAAC
CTTGAGCAGC ACTCCAATGA CCAGATCGCC GCCATCGCCG CCAAATCCGC GAAAGAGGCG
ACATACCACG TGGAACGCTC CTCCGATCTG GTGATCCGCC TGGGCGATGG AACGGATGAA
AGCCGGGCCA GGATGCAGGC GTCGCTCGAC CTTCTCTATC CCTATGTGGG CGAATTGTTC
ACCGAAGACA CCAGCCTGCC CGGCATTGAT CCGGCCCCCC TGCGCCCCGC CTTCGATGCG
ACCATCGGCG CGGTGCTGGA CGAGGCCACG CTGAGCGTCC CCGAAAGCCG GTTCGCCCAT
CAGGGCGGTT ACACCGGCGC GCGCCATTCC GAGCATCTGG GCCACCTGCT CACGCAGATG
CAGTGGCTCC AGCGCGCCTA TCCCGGTGCC CAATGGTAA
|
|---|
| Protein sequence | MPDVIQDRAD KALFEFLLRM GDNTLILGHR LSEWCGKGPV LEEDIALANT ALDFIGQTQM
WLGLAGEVEG KGRSADDLAM LRDAWDFRCC LLVQQPNGHF GQTLMRQFLF DNWHLSMLLN
LEQHSNDQIA AIAAKSAKEA TYHVERSSDL VIRLGDGTDE SRARMQASLD LLYPYVGELF
TEDTSLPGID PAPLRPAFDA TIGAVLDEAT LSVPESRFAH QGGYTGARHS EHLGHLLTQM
QWLQRAYPGA QW
|
|---|
| |