Gene Nham_0930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_0930 
Symbol 
ID4031924 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp1024907 
End bp1025758 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content65% 
IMG OID637969437 
Productphenylacetate-CoA oxygenase, PaaI subunit 
Protein accessionYP_576247 
Protein GI92116518 
COG category[S] Function unknown 
COG ID[COG3396] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02158] phenylacetate-CoA oxygenase, PaaI subunit 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCATCGC TCCCCGATAT CGCCCAGGCC GACGCAGCAG AACTCGCCCG CGAGGCCACC 
GCGCATGGTC AAGGACTGCA TGCGCCTTCG CCCGATGCGA ACCGGGACGC CTTTTTCGAA
TTCCTGCTGC GGATCGGAGA CACGACCCTG ATCCTGGGGC ACCGGGACTC GGAATGGTGC
GGACATTCGC CCGTGCTGGA GGAGGACATC GCACTGGCCA ATATGGCGCT GGACCTGATC
GGCCAGACCC AGCTCTGGCT CGGCCTCGCC GCCGAGGTGG AGGGCAAGGG CCGCACAGCG
GACGATCTCG CCTATCTGCG CGACGCCTGG GACTTCCGCA ACCTGCTGCT GGTCGAACGG
CCAAACGGCG ATTTCGGCCA TACGCTGATG CGGCATTTCC TGTTCGACAT CTATCACCTT
GCCCTGCTTC AGGCGCTGGC GACGTCGTCC GACCGGCGGG TCGCCGAGAT CGCCGCCAAG
GTCGGCAGGG AGGTAGCCTA TCATGTCGAG AGGACTTCCA ATCTGATCGT GCGCCTCGGC
GATGGAACCG ACGAGAGCCA CCGCCGCATG CAGGTCGCGC TCGACGCGTT GTGGCCTTAT
GTCGGCGAGA TGTTCATTGC CGACGAGAAG GACGAGGCGG TCGCCGCTGT GGGCATCGCG
CCGAATTCCG CAAGCCTGCG CGCGGCGTGG GAGAAGACGG TGCGCGACGT GCTCGCTGAG
GCAACGTTGA CGGTTCCGGA GAGCAAATTT GCCCATAAGG GCGGCAAGCG CGGCATCCAT
ACGGAGCATC TCGGCTACAT CCTCGCCGAC ATGCAGTTCC TGCAGCGCGC CTATCCCGGT
GCAAGCTGGT GA
 
Protein sequence
MPSLPDIAQA DAAELAREAT AHGQGLHAPS PDANRDAFFE FLLRIGDTTL ILGHRDSEWC 
GHSPVLEEDI ALANMALDLI GQTQLWLGLA AEVEGKGRTA DDLAYLRDAW DFRNLLLVER
PNGDFGHTLM RHFLFDIYHL ALLQALATSS DRRVAEIAAK VGREVAYHVE RTSNLIVRLG
DGTDESHRRM QVALDALWPY VGEMFIADEK DEAVAAVGIA PNSASLRAAW EKTVRDVLAE
ATLTVPESKF AHKGGKRGIH TEHLGYILAD MQFLQRAYPG ASW