| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_2867 |
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| Symbol | paaC |
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| ID | 5152723 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 2972292 |
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| End bp | 2973068 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640557746 |
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| Product | phenylacetic acid degradation protein paaC |
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| Protein accession | YP_001238900 |
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| Protein GI | 148254315 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3396] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR02158] phenylacetate-CoA oxygenase, PaaI subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.212868 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.316669 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCGCAC CCTCGATCAT CGTCTCGGAA ACGCCGCTGG TGCTGTACAC GCTGCGCCGG
GCTGATGATG CGCTGATCCT GGGGCATCGG CTGTCCGAAT GGTGTGGCCA TGCCCCGATG
CTCGAAGAGG ACATGGCGCT GTCCAACATG GCGCTCGATC TGATCGGCCA GGCGCGTGAG
CTGTATGGCT ACGCGGCGAA GGTCGAGGGG CGCGGTAATG ACGAGGACAA GCTCGCTTAT
CTGCGCGACG TCCGGCAGTA CCGCAATCTC CTCTTGGTCG AGCGTCCCAA CGGCGACTTC
GCGCACACGA TGGTGCGGCA GCTGTTCTAC GCGGCGTTCG CCGATCTCTA TTGGCGCGGC
ATGATGGGCT CGACGGATGC GACCCTGGCG GCGATCGCAG CCAAGTCGGA GAAGGAATCC
GCCTATCATC TGCGCCATGC CAGCGAATGG GTGATCCGGC TTGGCGACGG CACTGATGAG
AGCCACGCCC GCGTGCAGGT CGCGGTCGAC GATCTCTGGG CCTATACTGG CGAGATGTTC
GGCGCCGACG ATGCTGAGCG CGGCCTGATC GATGCCGGTG TCGCGATCGA TCCGACGATG
CTGCTGCCGG AGTGGCTGTC GATCGTCTCG CATGTCGCGC GCGAGGCGAC GCTGACCCTG
CCGGAAAACG ACTGGATGCA GCAGGGCGGC CGCGACGGCC GCCACAGCGA GCATCTCGGT
CATCTGCTCA GCGAGCTGCA ATATATGCAG CGCAGCTTCC CCGGTGCGAC ATGGTAG
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| Protein sequence | MTAPSIIVSE TPLVLYTLRR ADDALILGHR LSEWCGHAPM LEEDMALSNM ALDLIGQARE
LYGYAAKVEG RGNDEDKLAY LRDVRQYRNL LLVERPNGDF AHTMVRQLFY AAFADLYWRG
MMGSTDATLA AIAAKSEKES AYHLRHASEW VIRLGDGTDE SHARVQVAVD DLWAYTGEMF
GADDAERGLI DAGVAIDPTM LLPEWLSIVS HVAREATLTL PENDWMQQGG RDGRHSEHLG
HLLSELQYMQ RSFPGATW
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