Gene Svir_26510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_26510 
Symbol 
ID8387975 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2858689 
End bp2859594 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content70% 
IMG OID644976689 
Productphenylacetate-CoA oxygenase, PaaI subunit 
Protein accessionYP_003134466 
Protein GI257056634 
COG category[S] Function unknown 
COG ID[COG3396] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02158] phenylacetate-CoA oxygenase, PaaI subunit 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.199467 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.1627 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGGGGT GCGCCGTGGC TTTCGACAAC GCCTACCAGG CACTGGCGGA CAGCGTGGGA 
AACGACGACT CCCGGTGGGC CTTCGGAACC GGGTTCGTCG ATCCATTGTC CGGAGTGGAC
ACCTCTGTGC CTTCCGGAGT GGACGGTGAG GACCTGGCAG CGTACTGCCT CATGCTCGGT
GACGACGCGT TGATCTTCTC GCACCGGTTG CAGCAGTGGT GCACGAACGC CCCCGAGTTG
GAGGAGGAGG TCGCGCTGGC CAACATCGCG CTGGACCTGC TCGGTCAGGC CCGGCTGCTG
CTCACCCGGG CGGGCAAGGC CGACGGCACC GGTCGGGGGG AGGACGAGCT CGCGTTCTTC
CGTCCCGAGC ACGGGTTCCG CAACGTGCGG CTGGCCGAAC TGCCCCGCGG TGACTTCGGC
CAGCTGATCG CCGTGTTGCT GGTGTTTGCC ACCTGGCGGC TCGCGCTGTT CCAGCGGTTG
CGCGACTCGC GTGACCCGGT GCTCGGCGCC GTCGCGGACA AGGGGGTCAA GGAGCTCACC
TACCACCGTG ACCACGCCGC CCAATGGGCG GTGCGTCTCG GTGACGGCAC GGAGTTCTCC
CACGAGCGGA TGCAGGCCGG GCTGGAGAGC GTCTGGCCGT ACGTCGAGGA ACTGTTCACC
GCGCACGAGG TCGAACGGCG GGTGGCCGAG GCCGGAATCG GTGTCGACCC CGCCGAGGTG
CGCGCGGAGT TCGACGACGT CCTGGCGCGG GTGTGCTCGG CGGCCACGCT CCGGGTCCCC
GACACCCCGG CCCGAGCCGG GGTGTCCGGT CGAAGCGGCC GACACGGCGT GCACACCGAG
GCCCTGGGCT ACCTGCTGGC CGAGTTGCAG AGTGTCGCCC GAGCCCATCC GGACGCGACA
TGGTGA
 
Protein sequence
MRGCAVAFDN AYQALADSVG NDDSRWAFGT GFVDPLSGVD TSVPSGVDGE DLAAYCLMLG 
DDALIFSHRL QQWCTNAPEL EEEVALANIA LDLLGQARLL LTRAGKADGT GRGEDELAFF
RPEHGFRNVR LAELPRGDFG QLIAVLLVFA TWRLALFQRL RDSRDPVLGA VADKGVKELT
YHRDHAAQWA VRLGDGTEFS HERMQAGLES VWPYVEELFT AHEVERRVAE AGIGVDPAEV
RAEFDDVLAR VCSAATLRVP DTPARAGVSG RSGRHGVHTE ALGYLLAELQ SVARAHPDAT
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