| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Htur_4171 |
|---|
| Symbol | |
|---|
| ID | 8744799 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haloterrigena turkmenica DSM 5511 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013744 |
|---|
| Strand | - |
|---|
| Start bp | 441416 |
|---|
| End bp | 442183 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 646514719 |
|---|
| Product | phenylacetic acid catabolic family protein |
|---|
| Protein accession | YP_003405666 |
|---|
| Protein GI | 284167388 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3396] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.564404 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGAGG ACTGGTCCGA AGCGGCGGTC GACTACGTAC AGGCGATCTA CGACACGAAG
CTCCTGCTCG GACACCGGTA CGCCCAGTGG AGCCTCTCGG GACCGTCGCT CGAGGACGAT
ATCGGCGGAG CGAGCGCCGC CCAGGAGGAG ATCGGCCATG TTCGGCAACT GGCGCGCGAA
CTCGAAGAAC AGGGACGGGA CGCCGACTGG CTGAGCGGTC ACCGCGATCC CGACGAGTTC
GCCAACGCGG CCTGTCTCGA CCGCATCGAC GGCGAGTGGA CGACGTACAT GGCGTCGATC
GCGCCGGCCG ACCGAGCCGC GTGGTATCTG ATCGACGCGA TCGGCCGAGA CGATCTGTCC
GGCCTGATCA CCAAGATGGG CGAGGACGAG TACTTCCACC TCGAGTACCA CGATGCGCGA
CTCGAGACGC TGGCCGCAGA GGATCCCGAG ACGGTCCAGC AGACGCTGGA AACGACGCTT
CCTCAGACGC TCGCGCTCAT CGGCCCGGCC GCGTACGACG AGGACGAGGA TCCGCTGTAT
CAGACCGGAT TCACGGATCG ACCGATCGCC GAGATTCGCG AGTCGTTCGC CCAGCACTAC
CGTGATCTGT TCGCCGGAAC GGACGTCTCG CTCGAGGGCG TCGACTGGGA CGCGCCCGCG
CTCGAGGAGT GGGACGAAAC GCGGCGACGA GTGGATACCG GCTCGATCAG TGACACGGAC
GTCGAACAGC TCCGCGGCGA AGCGAACGAA CTGTTCGCGA TGAACTGA
|
|---|
| Protein sequence | MSEDWSEAAV DYVQAIYDTK LLLGHRYAQW SLSGPSLEDD IGGASAAQEE IGHVRQLARE
LEEQGRDADW LSGHRDPDEF ANAACLDRID GEWTTYMASI APADRAAWYL IDAIGRDDLS
GLITKMGEDE YFHLEYHDAR LETLAAEDPE TVQQTLETTL PQTLALIGPA AYDEDEDPLY
QTGFTDRPIA EIRESFAQHY RDLFAGTDVS LEGVDWDAPA LEEWDETRRR VDTGSISDTD
VEQLRGEANE LFAMN
|
|---|
| |