Gene Veis_3947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVeis_3947 
Symbol 
ID4693924 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVerminephrobacter eiseniae EF01-2 
KingdomBacteria 
Replicon accessionNC_008786 
Strand
Start bp4332226 
End bp4333002 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content68% 
IMG OID639851696 
Productphenylacetate-CoA oxygenase, PaaI subunit 
Protein accessionYP_998672 
Protein GI121610865 
COG category[S] Function unknown 
COG ID[COG3396] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02158] phenylacetate-CoA oxygenase, PaaI subunit 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.88088 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.372125 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAACGC CGAGCATCCA ATTGCGCCGG GACCCCGCCG TGCAGTACCT GCTGCGCCTG 
GGCGATACCT GCCTGATCCT GGGCCAGCGC CTGGCCTCAT GGTGCGGCCA CGGGCCGGTG
CTGGAAGAAG ACATTGCGCT GGCCAATATC GCGCTGGACC TGGTGGGCCA GGCGCGCGCG
CTGCTGACCC GGGCCGGCCA GGTGGAGGGC TGCGGCCACG ACGAAGACCA ACTGGCCTTT
CTGCGCGAAG AGCGCGACTA CTTCAATGTG ACCCTGGTGG AACTGCCGCG CGGCGACTTC
GCCTTCACGA TGGTGCGCAA TGCCATCGTG GCCACCTTGC TGAAACTGCT CTGGGAACGG
CTGCTCGGCT CCAGCGACAC CGAGTTGGCC GCCATCGCCG GCAAGGCCGT CAAGGAAGCC
CGCTACCACC AGCAGCATGC CGCCGACTGG GTGGTGCGGC TCGGCGACGG AACGCCCGAG
TCGCGCCGCC GCACCGAGGC GGCGCTGACC GCGCTGTGGC GCTACACGCC CGAACTGTTC
GTTGCCGACG CGGTGGAAGA GGCTGCCTGC GCCGCCGGTC TGGGCCCGCG CTGGGCCGAG
TTGCAACCGG CCTGGCAGGC CGAGATGGCG CAGATACTGG CGGCCGCCGG CCTGTCCTGC
CCGAAGGAAA CCGCTTTTCG CAGCACCGGC AAACAAGGGG TGCACAGCGA GCACATGGGT
TTCATCCTGA CCGACATGCA GTACCTGCAA CGCGCCTATC CCGGAGGCCA GTGGTGA
 
Protein sequence
MQTPSIQLRR DPAVQYLLRL GDTCLILGQR LASWCGHGPV LEEDIALANI ALDLVGQARA 
LLTRAGQVEG CGHDEDQLAF LREERDYFNV TLVELPRGDF AFTMVRNAIV ATLLKLLWER
LLGSSDTELA AIAGKAVKEA RYHQQHAADW VVRLGDGTPE SRRRTEAALT ALWRYTPELF
VADAVEEAAC AAGLGPRWAE LQPAWQAEMA QILAAAGLSC PKETAFRSTG KQGVHSEHMG
FILTDMQYLQ RAYPGGQW