Gene Strop_4071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_4071 
Symbol 
ID5060553 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp4629422 
End bp4630225 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content71% 
IMG OID640476332 
Productphenylacetate-CoA oxygenase, PaaI subunit 
Protein accessionYP_001160879 
Protein GI145596582 
COG category[S] Function unknown 
COG ID[COG3396] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02158] phenylacetate-CoA oxygenase, PaaI subunit 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.421064 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.190535 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCACAC ATGCCGAACA GATCGAACCG GGGACGATGC AGACCGCGCC GGGGGCCGAG 
CAGACCGCGC CGGGGGCTGT CGCCAGCCGC TTCGACTTCG TCCTGGGTCT CGCCGACGAC
GCGCTCGTCG CGGCCCAGCG ACTGGCCGAG TGGTGTACCC GCGGGCCGGA GATGGAAGAA
GACATCGCCC TGGCCAACAT CGCCCTCGAT CAACTCGGGG CGGCACGCCT GCTGCTGACC
CACGCGGGCG AGGTGGAGGG AGCCGGGCGG GACGAGGACG CGTTGGCGTA CCTGCGCGAC
GACCGGGAGT TCCGCAACTG CCTCCTGGTC GAGCTGCCCA ACGGTGACTT CGCGCTGACC
ATGGCGAAAC TGCTCTTCCT GGCGGCGTAC CAGGTGCCGC TCTACACCGC GCTGGCCGGG
TGCGGCGACG AGCGGCTGGC CGCGATCGGG GCGAAGGCGC GAAAGGAGTC GGCCTACCAC
CTGGATCACG CCTCGCTCTG GGTGCGGCGG CTCGGCGACG GCACGGACGA GTCGCATCGC
CGGATGCAGG CGGCGGTCGA CGAGGTCTGG CCGTACACGT ACGAACTCTT CACCCCGGAT
CCGACCACGC CGGTCGACCC GGCCACCCTG CGCGTCGACT TCGACTCGGT CGTCTCCGGT
GTGCTCGCCG AGGCCACGTT GACGGTGCCC GAGACCTCCT GGAGGCCGGC CGGCGGCCGG
GACGGCGTAC ACACCGAGCA CCTGTCGTAC CTGCTCGCCG AGCTACAGGT GCTGCACCGC
GCGCATCCAG GAGCGTCCTG GTGA
 
Protein sequence
MTTHAEQIEP GTMQTAPGAE QTAPGAVASR FDFVLGLADD ALVAAQRLAE WCTRGPEMEE 
DIALANIALD QLGAARLLLT HAGEVEGAGR DEDALAYLRD DREFRNCLLV ELPNGDFALT
MAKLLFLAAY QVPLYTALAG CGDERLAAIG AKARKESAYH LDHASLWVRR LGDGTDESHR
RMQAAVDEVW PYTYELFTPD PTTPVDPATL RVDFDSVVSG VLAEATLTVP ETSWRPAGGR
DGVHTEHLSY LLAELQVLHR AHPGASW