More than 300 homologs were found in PanDaTox collection
for query gene Pfl01_3948 on replicon NC_007492
Organism: Pseudomonas fluorescens Pf0-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007492  Pfl01_3948  Acyl-CoA dehydrogenase-like  100 
 
 
385 aa  801    Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.54725  normal 
 
 
-
 
NC_008740  Maqu_2805  acyl-CoA dehydrogenase domain-containing protein  79.48 
 
 
386 aa  664    Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_2692  acyl-CoA dehydrogenase domain-containing protein  92.47 
 
 
386 aa  747    Pseudomonas mendocina ymp  Bacteria  normal  0.0824192  normal  0.331355 
 
 
-
 
NC_008463  PA14_26700  putative acyl-CoA dehydrogenase  90.65 
 
 
386 aa  734    Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.472617  normal 
 
 
-
 
NC_009656  PSPA7_2265  putative acyl-CoA dehydrogenase  90.91 
 
 
386 aa  735    Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2817  acyl-CoA dehydrogenase-like  69.19 
 
 
383 aa  568  1e-161  Rhodoferax ferrireducens T118  Bacteria  normal  0.0246434  n/a   
 
 
-
 
NC_009485  BBta_0669  putative acyl-CoA dehydrogenase  67.53 
 
 
389 aa  570  1e-161  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.282449  normal  0.0349391 
 
 
-
 
NC_008228  Patl_0315  acyl-CoA dehydrogenase-like  66.93 
 
 
391 aa  563  1.0000000000000001e-159  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_3206  acyl-CoA dehydrogenase-like  66.75 
 
 
386 aa  558  1e-158  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.518782 
 
 
-
 
NC_012856  Rpic12D_0114  acyl-CoA dehydrogenase domain protein  66.41 
 
 
385 aa  558  1e-158  Ralstonia pickettii 12D  Bacteria  normal  0.773913  normal  0.835014 
 
 
-
 
NC_010682  Rpic_0107  acyl-CoA dehydrogenase domain protein  66.41 
 
 
385 aa  558  1e-158  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_2199  acyl-CoA dehydrogenase-like  67.71 
 
 
384 aa  557  1e-157  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.539227 
 
 
-
 
NC_011004  Rpal_2430  acyl-CoA dehydrogenase domain protein  66.84 
 
 
384 aa  554  1e-156  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.303023  n/a   
 
 
-
 
NC_007778  RPB_3266  Acyl-CoA dehydrogenase-like  66.49 
 
 
385 aa  554  1e-156  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.194467  normal  0.933861 
 
 
-
 
NC_007650  BTH_II0288  acyl-CoA dehydrogenase  66.4 
 
 
383 aa  549  1e-155  Burkholderia thailandensis E264  Bacteria  normal  0.553165  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1150  acyl-CoA dehydrogenase  65.09 
 
 
383 aa  542  1e-153  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_4452  acyl-CoA dehydrogenase domain protein  65.89 
 
 
384 aa  544  1e-153  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_009078  BURPS1106A_A2775  acyl-CoA dehydrogenase  65.35 
 
 
383 aa  543  1e-153  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A2930  acyl-CoA dehydrogenase  65.35 
 
 
383 aa  543  1e-153  Burkholderia pseudomallei 668  Bacteria  normal  0.168413  n/a   
 
 
-
 
NC_012791  Vapar_0324  acyl-CoA dehydrogenase domain protein  64.12 
 
 
386 aa  519  1e-146  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_4186  acyl-CoA dehydrogenase domain-containing protein  64.34 
 
 
388 aa  509  1e-143  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.245647 
 
 
-
 
NC_008786  Veis_1896  acyl-CoA dehydrogenase domain-containing protein  59.79 
 
 
394 aa  490  1e-137  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.398062 
 
 
-
 
NC_007348  Reut_B4462  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  59.9 
 
 
386 aa  468  1.0000000000000001e-131  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007973  Rmet_1722  acyl-CoA dehydrogenase-like protein  59.38 
 
 
388 aa  468  9.999999999999999e-131  Cupriavidus metallidurans CH34  Bacteria  normal  0.0209372  normal 
 
 
-
 
NC_009972  Haur_4761  acyl-CoA dehydrogenase domain-containing protein  58.58 
 
 
386 aa  466  9.999999999999999e-131  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_2414  acyl-CoA dehydrogenase domain-containing protein  57.85 
 
 
385 aa  452  1.0000000000000001e-126  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.228381  normal 
 
 
-
 
NC_013124  Afer_1029  acyl-CoA dehydrogenase domain protein  47.24 
 
 
381 aa  362  5.0000000000000005e-99  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.042764  n/a   
 
 
-
 
NC_013739  Cwoe_1590  acyl-CoA dehydrogenase domain protein  44.47 
 
 
396 aa  334  2e-90  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.663907 
 
 
-
 
NC_009675  Anae109_1179  acyl-CoA dehydrogenase domain-containing protein  43.77 
 
 
381 aa  321  9.999999999999999e-87  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.532385 
 
 
-
 
NC_007760  Adeh_1132  Acyl-CoA dehydrogenase, type 1  42.44 
 
 
385 aa  318  1e-85  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_1192  acyl-CoA dehydrogenase domain protein  42.18 
 
 
385 aa  317  2e-85  Anaeromyxobacter sp. K  Bacteria  normal  0.0644386  n/a   
 
 
-
 
NC_011891  A2cp1_1261  acyl-CoA dehydrogenase domain protein  41.91 
 
 
385 aa  317  3e-85  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.403217  n/a   
 
 
-
 
NC_007492  Pfl01_4696  Acyl-CoA dehydrogenase-like  40.91 
 
 
378 aa  289  6e-77  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.0700778  normal  0.0611001 
 
 
-
 
NC_009656  PSPA7_5007  acyl-CoA dehydrogenase  39.63 
 
 
378 aa  282  7.000000000000001e-75  Pseudomonas aeruginosa PA7  Bacteria  normal  0.284133  n/a   
 
 
-
 
NC_009439  Pmen_0898  acyl-CoA dehydrogenase domain-containing protein  39.84 
 
 
379 aa  281  1e-74  Pseudomonas mendocina ymp  Bacteria  normal  0.592416  normal 
 
 
-
 
NC_009943  Dole_0626  acyl-CoA dehydrogenase domain-containing protein  41.11 
 
 
386 aa  279  7e-74  Desulfococcus oleovorans Hxd3  Bacteria  decreased coverage  0.000000265202  n/a   
 
 
-
 
NC_014230  CA2559_00085  probable acyl-CoA dehydrogenase  35.79 
 
 
386 aa  272  7e-72  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2752  acyl-CoA dehydrogenase-like  38.74 
 
 
387 aa  272  9e-72  Rhodoferax ferrireducens T118  Bacteria  normal  0.171242  n/a   
 
 
-
 
NC_007950  Bpro_5265  acyl-CoA dehydrogenase-like  39.15 
 
 
381 aa  271  1e-71  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_4286  acyl-CoA dehydrogenase domain-containing protein  39.42 
 
 
379 aa  270  4e-71  Frankia sp. EAN1pec  Bacteria  normal  normal  0.330894 
 
 
-
 
NC_012793  GWCH70_3341  acyl-CoA dehydrogenase domain protein  37.6 
 
 
379 aa  269  7e-71  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_008048  Sala_3159  acyl-CoA dehydrogenase-like protein  37.93 
 
 
384 aa  269  7e-71  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_3899  acyl-CoA dehydrogenase domain-containing protein  40.43 
 
 
380 aa  268  1e-70  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.601021  normal 
 
 
-
 
NC_012793  GWCH70_1843  acyl-CoA dehydrogenase domain protein  38.46 
 
 
380 aa  267  2.9999999999999995e-70  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_3450  acyl-CoA dehydrogenase domain protein  37.33 
 
 
380 aa  266  5e-70  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009080  BMA10247_2728  long-chain specific acyl-CoA dehydrogenase  38.56 
 
 
378 aa  265  8.999999999999999e-70  Burkholderia mallei NCTC 10247  Bacteria  normal  0.890874  n/a   
 
 
-
 
NC_008836  BMA10229_A1825  acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  38.56 
 
 
378 aa  265  8.999999999999999e-70  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A3482  long-chain specific acyl-CoA dehydrogenase  38.56 
 
 
378 aa  265  8.999999999999999e-70  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_0071  acyl-CoA dehydrogenase  38.56 
 
 
378 aa  265  1e-69  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_0069  acyl-CoA dehydrogenase  38.56 
 
 
378 aa  265  1e-69  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_0285  putative acyl-CoA dehydrogenase  38.56 
 
 
430 aa  264  2e-69  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_3014  acyl-CoA dehydrogenase-like  37.7 
 
 
389 aa  264  2e-69  Polaromonas sp. JS666  Bacteria  normal  0.51583  normal  0.368309 
 
 
-
 
NC_007958  RPD_2198  acyl-CoA dehydrogenase-like  37.99 
 
 
379 aa  263  4e-69  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.583783 
 
 
-
 
NC_007951  Bxe_A2768  putative acyl-CoA dehydrogenase, long- chain specific  37.5 
 
 
391 aa  263  4.999999999999999e-69  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.466839 
 
 
-
 
NC_012793  GWCH70_1226  acyl-CoA dehydrogenase domain protein  36.17 
 
 
381 aa  262  6.999999999999999e-69  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_4164  acyl-CoA dehydrogenase domain protein  37.73 
 
 
380 aa  262  8e-69  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B2724  putative acyl-CoA dehydrogenase  39.3 
 
 
379 aa  262  8e-69  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_1015  acyl-CoA dehydrogenase domain-containing protein  38.68 
 
 
381 aa  261  1e-68  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.629454 
 
 
-
 
NC_013510  Tcur_1158  acyl-CoA dehydrogenase domain protein  38.79 
 
 
380 aa  261  1e-68  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_0526  acyl-CoA dehydrogenase domain-containing protein  39.21 
 
 
381 aa  260  2e-68  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0149792 
 
 
-
 
NC_013411  GYMC61_2439  acyl-CoA dehydrogenase domain protein  37.4 
 
 
380 aa  261  2e-68  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010678  Rpic_4927  acyl-CoA dehydrogenase domain protein  37.57 
 
 
380 aa  261  2e-68  Ralstonia pickettii 12J  Bacteria  normal  normal  0.905693 
 
 
-
 
NC_008786  Veis_4102  acyl-CoA dehydrogenase domain-containing protein  37.6 
 
 
388 aa  261  2e-68  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.757866  normal  0.974192 
 
 
-
 
NC_012857  Rpic12D_3850  acyl-CoA dehydrogenase domain protein  37.57 
 
 
380 aa  261  2e-68  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_3267  Acyl-CoA dehydrogenase-like  37.04 
 
 
379 aa  259  4e-68  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.691288  normal  0.607013 
 
 
-
 
NC_013159  Svir_16500  acyl-CoA dehydrogenase  38.58 
 
 
384 aa  260  4e-68  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_2106  acyl-CoA dehydrogenase domain protein  36.44 
 
 
381 aa  260  4e-68  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013440  Hoch_5486  acyl-CoA dehydrogenase domain protein  38.68 
 
 
381 aa  259  4e-68  Haliangium ochraceum DSM 14365  Bacteria  normal  0.361587  normal  0.275815 
 
 
-
 
NC_009767  Rcas_2461  acyl-CoA dehydrogenase domain-containing protein  38.67 
 
 
381 aa  259  6e-68  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.160964  normal 
 
 
-
 
NC_009439  Pmen_2640  acyl-CoA dehydrogenase domain-containing protein  39.74 
 
 
382 aa  258  9e-68  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_007651  BTH_I0060  acyl-CoA dehydrogenase  37.77 
 
 
378 aa  258  1e-67  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_3613  acyl-CoA dehydrogenase domain-containing protein  37.99 
 
 
382 aa  257  2e-67  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_2429  acyl-CoA dehydrogenase domain protein  37.04 
 
 
382 aa  256  3e-67  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.62219  n/a   
 
 
-
 
NC_009380  Strop_4326  acyl-CoA dehydrogenase domain-containing protein  39.64 
 
 
388 aa  256  3e-67  Salinispora tropica CNB-440  Bacteria  normal  normal  0.0122368 
 
 
-
 
NC_008740  Maqu_2118  acyl-CoA dehydrogenase domain-containing protein  36.34 
 
 
382 aa  256  4e-67  Marinobacter aquaeolei VT8  Bacteria  normal  0.0463825  n/a   
 
 
-
 
NC_013441  Gbro_0451  acyl-CoA dehydrogenase domain protein  38.32 
 
 
382 aa  256  7e-67  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013922  Nmag_3108  acyl-CoA dehydrogenase domain protein  37.14 
 
 
383 aa  255  8e-67  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_009338  Mflv_4612  acyl-CoA dehydrogenase domain-containing protein  37.96 
 
 
392 aa  254  1.0000000000000001e-66  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_011772  BCG9842_B5488  acyl-CoA dehydrogenase  34.93 
 
 
379 aa  255  1.0000000000000001e-66  Bacillus cereus G9842  Bacteria  normal  0.270181  hitchhiker  1.62736e-22 
 
 
-
 
NC_008463  PA14_44590  putative acyl-CoA dehydrogenase  39.21 
 
 
382 aa  254  1.0000000000000001e-66  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.115887 
 
 
-
 
NC_011725  BCB4264_A5464  acyl-CoA dehydrogenase  34.93 
 
 
379 aa  254  2.0000000000000002e-66  Bacillus cereus B4264  Bacteria  unclonable  0.0000608426  n/a   
 
 
-
 
NC_013131  Caci_4432  acyl-CoA dehydrogenase domain protein  36.87 
 
 
387 aa  254  2.0000000000000002e-66  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.0429863 
 
 
-
 
NC_007794  Saro_0132  long-chain acyl-CoA dehydrogenase  35.81 
 
 
384 aa  254  2.0000000000000002e-66  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_1327  acyl-CoA dehydrogenase domain protein  36.61 
 
 
399 aa  253  3e-66  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009656  PSPA7_3798  putative acyl-CoA dehydrogenase  38.95 
 
 
382 aa  253  3e-66  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_3923  acyl-CoA dehydrogenase domain protein  37.11 
 
 
381 aa  253  4.0000000000000004e-66  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_3740  acyl-CoA dehydrogenase-like protein  36.48 
 
 
382 aa  252  6e-66  Mycobacterium sp. MCS  Bacteria  normal  0.421985  n/a   
 
 
-
 
NC_008705  Mkms_3813  acyl-CoA dehydrogenase domain-containing protein  36.48 
 
 
382 aa  252  6e-66  Mycobacterium sp. KMS  Bacteria  normal  normal  0.285243 
 
 
-
 
NC_006274  BCZK5041  acyl-CoA dehydrogenase  35.2 
 
 
379 aa  252  7e-66  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_3438  acyl-CoA dehydrogenase domain-containing protein  36.36 
 
 
379 aa  252  8.000000000000001e-66  Marinobacter aquaeolei VT8  Bacteria  normal  0.0342749  n/a   
 
 
-
 
NC_013743  Htur_0919  acyl-CoA dehydrogenase domain protein  37.2 
 
 
383 aa  252  9.000000000000001e-66  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_011658  BCAH187_A5519  acyl-CoA dehydrogenase  34.93 
 
 
379 aa  252  9.000000000000001e-66  Bacillus cereus AH187  Bacteria  normal  0.814074  n/a   
 
 
-
 
NC_003909  BCE_5472  acyl-CoA dehydrogenase  34.93 
 
 
379 aa  251  1e-65  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_3752  acyl-CoA dehydrogenase domain-containing protein  35.96 
 
 
382 aa  250  2e-65  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_012793  GWCH70_0441  acyl-CoA dehydrogenase domain protein  36.34 
 
 
401 aa  251  2e-65  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_5434  acyl-CoA dehydrogenase  34.93 
 
 
379 aa  251  2e-65  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.0000000000000286159 
 
 
-
 
NC_009943  Dole_2182  acyl-CoA dehydrogenase domain-containing protein  38.46 
 
 
380 aa  251  2e-65  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000000233071  n/a   
 
 
-
 
NC_005945  BAS5190  acyl-CoA dehydrogenase  34.93 
 
 
379 aa  250  3e-65  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_3147  acyl-CoA dehydrogenase domain-containing protein  37.6 
 
 
382 aa  250  3e-65  Frankia sp. EAN1pec  Bacteria  normal  0.880335  normal 
 
 
-
 
NC_007530  GBAA_5586  acyl-CoA dehydrogenase  34.93 
 
 
379 aa  250  3e-65  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
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