| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Veis_1896 |
|---|
| Symbol | |
|---|
| ID | 4692933 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Verminephrobacter eiseniae EF01-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008786 |
|---|
| Strand | - |
|---|
| Start bp | 2124189 |
|---|
| End bp | 2125373 |
|---|
| Gene Length | 1185 bp |
|---|
| Protein Length | 394 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639849663 |
|---|
| Product | acyl-CoA dehydrogenase domain-containing protein |
|---|
| Protein accession | YP_996667 |
|---|
| Protein GI | 121608860 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.398062 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGTTCA CACACCAGCA CCGCGAAATC CAGGACAGCC TCAAGCGCTT CATCGACGAG
GAGATCAACC CCCATGTCGA CGACTGGGAG GCGGCCGAGA TCTTCCCCGC GCACGAGATC
TTCAAAAAAC TGGGCCGGCT CGGGTTTCTC GGCCTGTGCC AGCCCGAAGC CTATGGCGGC
GCGGGGCTGG ACTACTCGTA CAGCCTGGCG ATGGCCGAGA CCCTGGGCCA TATCCACTGC
GGCGGCGTGC CGATGGCCAT TGGCGTGCAG ACCGACATGT GCACCCCGGC GCTGGCCCGC
CACGGCAGCG AGGAGCTCAA GCAGCAATTC CTGGCCCCGG CGATAGCCGG CGACATGGTC
GGCTGCATCG GCGTGAGCGA GCCGGACGCC GGCAGCGATG TCGCGGGCAT CCGCAGCGTG
GCGCGCAAGG ATGGCGCCGA CTACCTGATC AGCGGCCAGA AGATGTGGAT CACCAACAGC
CTGCAGGCCG ACTGGATGTG CATGCTGGTC AACACCGACA GCGGCAGCGG CAGCGCGCAC
AAGAACAAAA GCCTGGTGAT CGTGCCGCTG CGCGCCGGCC CCGGCGGCAA GCTGACCCCG
GGCGTGCAGA TCGCGCAGAA GATCCGCAAG ATCGGCATGC ACAGCAGCGA CACCGGGCTG
CTCCATTTCG ATGAAGTGCG CGTGCCGCAG CGCTACCGCA TCGGCGCCGA AGGCCAGGGC
TTCGTCTACC AGATGCAGCA GTTTCAGCAA GAGCGCCTGT GGTGCGCGGC CAGCACGCTC
GAAACGCTGA CCCACTGCAT CGACTGGACC ATCGAATGGG CCCGGCAGCG CCAACTCTTT
GGCGGTGCGC TGGCCGACCA GCAGTGGGTG CAGTTCAAGC TGGCCGAGCT GAAAACCGAG
GTCGAGGCCC TGCGCGCGCT CACTTACCGC GCCTGCGACC TGTATGTGGC CGGGCAGGAT
GTGCTGGAAC TGGCCAGCAT GGCCAAACTC AAGGCCGGCC GGCTCAACCG CACCGTGCCC
GACACCTGCC TGCAGTTCTG GGGCGGCATG GGCTACACGC TGGAGAACAA GGTCGCGCGC
ATGTACCGCG ACGGCCGGCT GGCCTCGATC GGCGGCGGCG CGGACGAGGT GATGCTGGGC
ATCATCGCCA AGACCATGGG GATTGCCAAG CGGCCCGGGC ATTGA
|
|---|
| Protein sequence | MQFTHQHREI QDSLKRFIDE EINPHVDDWE AAEIFPAHEI FKKLGRLGFL GLCQPEAYGG
AGLDYSYSLA MAETLGHIHC GGVPMAIGVQ TDMCTPALAR HGSEELKQQF LAPAIAGDMV
GCIGVSEPDA GSDVAGIRSV ARKDGADYLI SGQKMWITNS LQADWMCMLV NTDSGSGSAH
KNKSLVIVPL RAGPGGKLTP GVQIAQKIRK IGMHSSDTGL LHFDEVRVPQ RYRIGAEGQG
FVYQMQQFQQ ERLWCAASTL ETLTHCIDWT IEWARQRQLF GGALADQQWV QFKLAELKTE
VEALRALTYR ACDLYVAGQD VLELASMAKL KAGRLNRTVP DTCLQFWGGM GYTLENKVAR
MYRDGRLASI GGGADEVMLG IIAKTMGIAK RPGH
|
|---|
| |